Gene Shewmr4_3660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3660 
Symbol 
ID4254224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4371153 
End bp4371701 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID638120303 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_735781 
Protein GI113971988 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATA AACATCAACT CGGATTCGTC TTCAGACAAG AGAACTGTGT CGGCTGCCAA 
GCCTGCACTA TTGCCTGCCA AATCCACAAT GAACTCCCAG AAGACGTACG ATTTCGTAAA
GTCGACAGAT ATGAAGTGCA GCGCGATGAC GGTGCGGTAG ACGTGTGGCT AAGCCACTCC
TGTATGCACT GTGGCAATCC AGCCTGCTTA ATTGCCTGCC CTGCCCAAGC TTATACCGTT
CGCAGTGACG GACTCGTCGT GCTTAACCGC GATAAATGTA CTGGCTGTGG TCTGTGTGTC
AGTGCCTGTC CTTACGACGC TGTCGTCATG CTTAAAACCG ATGGTAAAGC CGCTAAATGC
AATATGTGCA TAGAACTGAT CGACCAAGGT CTGAAGCCTG CATGTGTCGA TGGCTGCCCG
GTGAAATGTC TCGATACCGA CCGTATCAAC CAACTTCTCG CTCAAAAAAC TTCGGTCTCC
AAGCAAGGGA TTGGTTACGG TAACTGCGTC ACTAAACCTA ACATGGTGAT CGTTAAGGAA
CGGCTATGA
 
Protein sequence
MENKHQLGFV FRQENCVGCQ ACTIACQIHN ELPEDVRFRK VDRYEVQRDD GAVDVWLSHS 
CMHCGNPACL IACPAQAYTV RSDGLVVLNR DKCTGCGLCV SACPYDAVVM LKTDGKAAKC
NMCIELIDQG LKPACVDGCP VKCLDTDRIN QLLAQKTSVS KQGIGYGNCV TKPNMVIVKE
RL