| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3659 |
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| Symbol | |
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| ID | 4254223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4368940 |
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| End bp | 4371141 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120302 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_735780 |
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| Protein GI | 113971987 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCG ATAGACGCAC GTTTTTACAG GGAGCTGCAG CAAGCGCTGT GCTGTCCTCC
CTGTCAGGGT TAACCCCCGG CATAGCACAT GCCAAACAAC CAGGTGCCAA TACAGGTCTA
TTGGCAAAAC GCAATGGAGA TGTTGTTTAT CATAGTTGTT TACGCAACTG TGCAGCCCGA
TGTTTACTCA AGTTTAGAGT ACAAGATGGG CGTATGACCT ATGTCTCTGG GGCAGAAGAA
CAAGCCAAAA CCGGTTTAGC TCCCTGTCTA AAAGGCCAAA GCTACGTCCA GTACACCTAT
GCCGCCGACC GGATCCTACA TCCAATGGAA CGTGTTGGTA ACAAAGGAGA AGGTAAATGG
CGTCGGATCA GTTGGGATGA GGCCTACAGA AAAATATCAA GCCGTTTCAA ACAGATAATT
GCTGAACACG GCTCAGAAGC CATTCTACCC TATAGCTACT CTGGTAATTA TGGCGCCATT
GGAATGTCCG CTTCCGGTGA ACGCTTCTGG AACCGTATCG GCTCCTCTAT TCTTGAACGT
AAAGTCTGTA CCTATGCCGC TTATGATGGA CTCGAATCCT TGTATGGCAC CTTCCTAGGC
CCTGATCCTG AGGATATCTT ACTCAGTGAT GTGTACCTCA CCTGGGGACA TGACGAAGTC
GTCTCGAACA CTATTGCAAT CAAACTCATT AACCAAGCCC GTGATCGCGG CACCAAACTG
TTAGCCGTCA ATCCACAACG GACCCCTTTA TGTTCACAGG CAGATATTTA TCTGCAACCT
CGCCCCAGTA CAGATGTGCA ACTCTGCGCC GGTATAATGA AATATCTTGT AGAGAAAGAT
CTTGTTAACC ATCAGTTTAT CGCAGAACAG ACCATCGGCT ACGACGCCCT ATTGCAACGC
TTAAATGAGA TCAGTTACGA CGAAATCGAG ACAATTACCG GAGTTCCTCG AGCAAAAATG
TTCGAATTTG CCAAGGTACT AGGTGAAAAC GAAAAAACCA TGTTGCGTAT GGGCTATGGT
TTCCAACGTA ACTTTAACGG TGCCCGCATG TCACGCGCCG TAGCCATGTT GCTCGCTGTG
ACAGGGAACT TTGGTAAGCG TGGTAACGGG TTAATCTACG ATAACGTCCA TGCTGGCGGA
GGGCTGAATC AATACCAAGC AAGCGGTAAA TATATGCGCT CCAATCCTGA TGCGCAGCGG
ATCAATATGA CGGAGCTTGC CAAGGCGCTT CATCCTACAC ATCCCACCAG CCATGACAAA
CCGAGTAAAC CGATTCACGG CATGATTATC TATAACGGTA ACCCTGTCGT TGTGGCACCG
GATACCAATG CCGTTATCGA AGGTATGAAA CGGGAAGATC TGTTTGTGGT CGGCCATGAC
ATGGTCATGA CGGACTCACT GCAATACTGC GATATTATCC TGCCTGCGGC CAGCCAATTT
GAAACCGATG ATATCGTCGG CGACTACCAT GGCTACTATG TGCAGGTCTG TCAGAAAGTC
ATTGAACCGC TGGGAGAATC TAAGTGTAAC TGGACCTTCT TCCGTGAATT AGGCCAAGCC
ATGGGATTTG AAGATCCCGC CTTCAAAGCC AGTAACGATG ACATCATTCG CGAGTTGCTA
ACAACAGATT CACCTTACTA TAAGGGGGTC AGCTACGAGC GATTAATGAA GGAAAAATAC
ATCAAGCTAG ACATTCCCCA ACCTGTACTC GCCGATGGTA AATACGATAC GCCAAGTGGC
AAGATTGAAT TTAGTTCTCA GCTCATGGCT GACGCAGGTT TTCACCCTGT ACTCGATTGG
GGTTTGCCAG AAGACGAGAT GGAAGCCAGA GAAAAAGCCC TTCCCTTCCG CCTACTCTCA
TCTGGCGTCC CACAGCGGGT CAATAGCTCC TTCTACAATG TTAAATACAT CCGCGCCATT
CCCGCCTACT ACGTGAAAAT TAACCCTGAA GATGCAAAGA CGTACGGCAT CAAGAACAAC
GACAGAGTCC AACTCAGTAA TCACCGCGGT GATGCCAAGT TCGTGGCCAT GATTACCACA
GGGGTGCCCC AAGGGACCTT AATGAGCCCC AAATGTAACT GGCTCAGACT CAATCCTAAC
GGCACAGAAG GTTGTACTAA CTCATTGACA ACAGACAGGT TGACCGACAT GGGTGGTTGC
TCTGCCTACC ATTCAACCCG CGTGTCTTTG GCTAAAGCCT GA
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| Protein sequence | MKIDRRTFLQ GAAASAVLSS LSGLTPGIAH AKQPGANTGL LAKRNGDVVY HSCLRNCAAR
CLLKFRVQDG RMTYVSGAEE QAKTGLAPCL KGQSYVQYTY AADRILHPME RVGNKGEGKW
RRISWDEAYR KISSRFKQII AEHGSEAILP YSYSGNYGAI GMSASGERFW NRIGSSILER
KVCTYAAYDG LESLYGTFLG PDPEDILLSD VYLTWGHDEV VSNTIAIKLI NQARDRGTKL
LAVNPQRTPL CSQADIYLQP RPSTDVQLCA GIMKYLVEKD LVNHQFIAEQ TIGYDALLQR
LNEISYDEIE TITGVPRAKM FEFAKVLGEN EKTMLRMGYG FQRNFNGARM SRAVAMLLAV
TGNFGKRGNG LIYDNVHAGG GLNQYQASGK YMRSNPDAQR INMTELAKAL HPTHPTSHDK
PSKPIHGMII YNGNPVVVAP DTNAVIEGMK REDLFVVGHD MVMTDSLQYC DIILPAASQF
ETDDIVGDYH GYYVQVCQKV IEPLGESKCN WTFFRELGQA MGFEDPAFKA SNDDIIRELL
TTDSPYYKGV SYERLMKEKY IKLDIPQPVL ADGKYDTPSG KIEFSSQLMA DAGFHPVLDW
GLPEDEMEAR EKALPFRLLS SGVPQRVNSS FYNVKYIRAI PAYYVKINPE DAKTYGIKNN
DRVQLSNHRG DAKFVAMITT GVPQGTLMSP KCNWLRLNPN GTEGCTNSLT TDRLTDMGGC
SAYHSTRVSL AKA
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