| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3639 |
|---|
| Symbol | |
|---|
| ID | 4254203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4350581 |
|---|
| End bp | 4352086 |
|---|
| Gene Length | 1506 bp |
|---|
| Protein Length | 501 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638120282 |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_735760 |
|---|
| Protein GI | 113971967 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCGA ACCTGCTTGC GATACTTCCC CTGTTATTAA CCCTAGTGCT AGCCCTTTGG
CTACGGCGTA CCTTAGTGGC GCTGGGTGTC GGTATCCTCT CGGGCGCCTT AATCATTGCC
CACTTCGATA TAGTACAAAG CTTGGGCTAT CTCTTGGAGA TAGGTGCTAA GCAGTTTTAC
AGCCAAGGCG CTTGGCAGTG GTGGCATTTA AACGTGCTGA TGGCCATGTT GCTGCTGGGC
AGCATGACGC AGCTCCTCGC CAGAAGCGGT GCGGTAGAGC AATTTGGTGA TTGGCTATAT
CGACGTATTC GTACGGGACG ACAGGCGCGT ATTGGTGTGG TGCTGTTGGG CTGGTTGGTT
TTTATCGACG GTATTTTTAG TTGCCTCGCC GTAGGGCATG TGTGCCAACC TCTGAGCCAG
CGTTATGGCA TCCGTCAGAC GCAGCTGGCC TATTTAGTCG ACTCTAATGC GTCGCCGCTC
TGTTCACTCT TGCCTTTTTC TAGCTGGGGG CCCTATGTGA TGGCGCTCTT GGCGGGACTC
AGCTTTTTAC CCGTTTCAGC CCTTGAGGCC TTCATCGACG TCGCCTTATT CAATTTTTAT
GCGATAACCA CCTTAGGCTT GTCGCTGATT GTGGCTTGGT TTGGGATGGG GTTTCGCCCC
ATCGAGAATG CAGTATTGGC GGCTGATCCC GTTGAGCCAA GTTTAACTCC CTCCCAAGGC
AATCCTTGGC TGCTTGCGAT CCCCATGCTG ACCTTACTGT GCGCCTCTGT CGGTTTAACT
CTCTGGTCTG GTGCGCAGCA GGTGCCATCA TGGGATATTT CGGCCTGGTT AGCTAAAGCC
GATATTGGCG CCGCGATGCG CGATGCCTGT CTGTTATCGA CCTTAGTCAC GCTAGTGTTG
TTGATGTTGT CGGGCCGAAG CATAGGGAAA CTGCTGGCGG ACTTAGTGCA TGGCGTGCGG
ATGATCGCCT TTGCCATCGC GATTTTACTC TGTACTTGGA TGATAGGCGC GGTGATCCAA
GATCTGGGGG TGGCGAGCTT GTTGGCGGCT TGGGCTAAAT TGTATTTATC CCCGAGTCTG
CTGGTGGCGG GGATGTTTCT ACTCTGCGCT ATCATGGCCT TTGCCACAGG CTCAAGCTGG
GGTACCTTTG CGATTATGAT CCCCATCGGT GGGGAAATTG CCCATAACAT GGATGTCAGC
TTGCTGTTAC CTGTATTGAG TGCGGTGATG GCGGGTTCTG TGTTTGGCGA TCATTGCTCG
CCGATTTCCG ATACTAGCGT GCTGAGTGCG ACGAGTTCTG GCTGCTTACC CCATGACCAT
GTGGTGACTC AACTGCCGTT TGCATTAATC GGAGCTGGTG CGGCATTAGT GGGATTTCAG
TTAGTTAACT TATCGGTTGC AACCCTGTTC GTGTGGTTTG GGGTCATAGG CACTGCGTTA
GGGTTATTGG CCTTAATGAC ACGCTTTTAT CCACCTTGGC TGAGCGCTCG TTCGCAGACA
AACTGA
|
|---|
| Protein sequence | MSPNLLAILP LLLTLVLALW LRRTLVALGV GILSGALIIA HFDIVQSLGY LLEIGAKQFY
SQGAWQWWHL NVLMAMLLLG SMTQLLARSG AVEQFGDWLY RRIRTGRQAR IGVVLLGWLV
FIDGIFSCLA VGHVCQPLSQ RYGIRQTQLA YLVDSNASPL CSLLPFSSWG PYVMALLAGL
SFLPVSALEA FIDVALFNFY AITTLGLSLI VAWFGMGFRP IENAVLAADP VEPSLTPSQG
NPWLLAIPML TLLCASVGLT LWSGAQQVPS WDISAWLAKA DIGAAMRDAC LLSTLVTLVL
LMLSGRSIGK LLADLVHGVR MIAFAIAILL CTWMIGAVIQ DLGVASLLAA WAKLYLSPSL
LVAGMFLLCA IMAFATGSSW GTFAIMIPIG GEIAHNMDVS LLLPVLSAVM AGSVFGDHCS
PISDTSVLSA TSSGCLPHDH VVTQLPFALI GAGAALVGFQ LVNLSVATLF VWFGVIGTAL
GLLALMTRFY PPWLSARSQT N
|
|---|
| |