Gene Shewmr4_3639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3639 
Symbol 
ID4254203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4350581 
End bp4352086 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content53% 
IMG OID638120282 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_735760 
Protein GI113971967 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGA ACCTGCTTGC GATACTTCCC CTGTTATTAA CCCTAGTGCT AGCCCTTTGG 
CTACGGCGTA CCTTAGTGGC GCTGGGTGTC GGTATCCTCT CGGGCGCCTT AATCATTGCC
CACTTCGATA TAGTACAAAG CTTGGGCTAT CTCTTGGAGA TAGGTGCTAA GCAGTTTTAC
AGCCAAGGCG CTTGGCAGTG GTGGCATTTA AACGTGCTGA TGGCCATGTT GCTGCTGGGC
AGCATGACGC AGCTCCTCGC CAGAAGCGGT GCGGTAGAGC AATTTGGTGA TTGGCTATAT
CGACGTATTC GTACGGGACG ACAGGCGCGT ATTGGTGTGG TGCTGTTGGG CTGGTTGGTT
TTTATCGACG GTATTTTTAG TTGCCTCGCC GTAGGGCATG TGTGCCAACC TCTGAGCCAG
CGTTATGGCA TCCGTCAGAC GCAGCTGGCC TATTTAGTCG ACTCTAATGC GTCGCCGCTC
TGTTCACTCT TGCCTTTTTC TAGCTGGGGG CCCTATGTGA TGGCGCTCTT GGCGGGACTC
AGCTTTTTAC CCGTTTCAGC CCTTGAGGCC TTCATCGACG TCGCCTTATT CAATTTTTAT
GCGATAACCA CCTTAGGCTT GTCGCTGATT GTGGCTTGGT TTGGGATGGG GTTTCGCCCC
ATCGAGAATG CAGTATTGGC GGCTGATCCC GTTGAGCCAA GTTTAACTCC CTCCCAAGGC
AATCCTTGGC TGCTTGCGAT CCCCATGCTG ACCTTACTGT GCGCCTCTGT CGGTTTAACT
CTCTGGTCTG GTGCGCAGCA GGTGCCATCA TGGGATATTT CGGCCTGGTT AGCTAAAGCC
GATATTGGCG CCGCGATGCG CGATGCCTGT CTGTTATCGA CCTTAGTCAC GCTAGTGTTG
TTGATGTTGT CGGGCCGAAG CATAGGGAAA CTGCTGGCGG ACTTAGTGCA TGGCGTGCGG
ATGATCGCCT TTGCCATCGC GATTTTACTC TGTACTTGGA TGATAGGCGC GGTGATCCAA
GATCTGGGGG TGGCGAGCTT GTTGGCGGCT TGGGCTAAAT TGTATTTATC CCCGAGTCTG
CTGGTGGCGG GGATGTTTCT ACTCTGCGCT ATCATGGCCT TTGCCACAGG CTCAAGCTGG
GGTACCTTTG CGATTATGAT CCCCATCGGT GGGGAAATTG CCCATAACAT GGATGTCAGC
TTGCTGTTAC CTGTATTGAG TGCGGTGATG GCGGGTTCTG TGTTTGGCGA TCATTGCTCG
CCGATTTCCG ATACTAGCGT GCTGAGTGCG ACGAGTTCTG GCTGCTTACC CCATGACCAT
GTGGTGACTC AACTGCCGTT TGCATTAATC GGAGCTGGTG CGGCATTAGT GGGATTTCAG
TTAGTTAACT TATCGGTTGC AACCCTGTTC GTGTGGTTTG GGGTCATAGG CACTGCGTTA
GGGTTATTGG CCTTAATGAC ACGCTTTTAT CCACCTTGGC TGAGCGCTCG TTCGCAGACA
AACTGA
 
Protein sequence
MSPNLLAILP LLLTLVLALW LRRTLVALGV GILSGALIIA HFDIVQSLGY LLEIGAKQFY 
SQGAWQWWHL NVLMAMLLLG SMTQLLARSG AVEQFGDWLY RRIRTGRQAR IGVVLLGWLV
FIDGIFSCLA VGHVCQPLSQ RYGIRQTQLA YLVDSNASPL CSLLPFSSWG PYVMALLAGL
SFLPVSALEA FIDVALFNFY AITTLGLSLI VAWFGMGFRP IENAVLAADP VEPSLTPSQG
NPWLLAIPML TLLCASVGLT LWSGAQQVPS WDISAWLAKA DIGAAMRDAC LLSTLVTLVL
LMLSGRSIGK LLADLVHGVR MIAFAIAILL CTWMIGAVIQ DLGVASLLAA WAKLYLSPSL
LVAGMFLLCA IMAFATGSSW GTFAIMIPIG GEIAHNMDVS LLLPVLSAVM AGSVFGDHCS
PISDTSVLSA TSSGCLPHDH VVTQLPFALI GAGAALVGFQ LVNLSVATLF VWFGVIGTAL
GLLALMTRFY PPWLSARSQT N