Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3634 |
Symbol | |
ID | 4254198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4347258 |
End bp | 4348349 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120277 |
Product | branched-chain amino acid aminotransferase |
Protein accession | YP_735755 |
Protein GI | 113971962 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | [TIGR01123] branched-chain amino acid aminotransferase, group II |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATAA AATACGATTT AAAACCTGCG TCCGAACGCC GTACTGAGCA ATTCAAGCCC GAAGGAAATG TGGGCTTCGG TAGCCTCAGA ACCGATCATA TGTTTTTAAT GGATTATCGC GATGGTGAAT GGCGCGATCC ACGTATTGTG CCCTACGGTC CGTTTGAAAT GGCGCCGGGT GCGATGGCCC TGCATTATGG TCAGTCCATC TTCGAAGGCG CCAAGGCCTT TATGCATGAA GATGGCGAAA TTTACACTTT CCGTATCAAC AAAAACGCCG AGCGTATGAA TCGCTCTGCG GATATTGTCT GTATTCCTAA TATCGATGAG CAGATGCAAA TCGATGCGAT CAACGCCTTG ATCGACGTAG ACCGTCTCTG GTTCCCGATG CAAGAAGGTG CCTGTTTATA CATTCGCCCC TTTATTTTTG CGACCGAAGA CCGTCTGTCT GTGAGTCCAA GTACGCGCTA CACATTCTGC GTGGTGTTAA GCCCAAGTGG TGCTTACTAC GCGGCGGGTG TGAATAAAGG CATTCGTCTG CTGATCAGCA AGACTTACCA TCGCGCCGTA TCGGGTGGTA CTGGCGCCTC TAAAGCGGCG GGTAACTATG CTGCCTCATT GCGTGCCGGT AAAGCTGCCG CGCAGTTTGG TGCATCACAG GTGCTGTATT TAGATGCGAA CAACCAACAG ATTGAAGAAG CGGGCGCCAT GAACCACTTC CACATTCTGA AAGACGGCAC AGTGATCATC CCAACCTTCA CCGATACCAT CTTAAAATCC ATTACCTCGC AATCCATTAT GGAGCTGGGT GAGTTACTCG GCTGCGAAGT GCGCCAAGAG ACTGTTATGC TGGATAAGTT TATCGCCGAT ATCGAATCTG GTGAGATTAT CGAAGCGGGT GGTTTTGGTA CGGCTGCCGT GGTATCTGCT GTCGGTTCCT ATATTTTTGA AGATGGCCGA GTGGTGACCG TGGGCAACGG TGAAGTGGGT GAGCATATTC AACGCATCTA CAAGCTGTAT ACCGATATCC AGAAAGGCCA TATCCAAGGC CCGGATGGCT GGGTGAAACG TGTTGAGCGT GTCGCGCCTT AA
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Protein sequence | MEIKYDLKPA SERRTEQFKP EGNVGFGSLR TDHMFLMDYR DGEWRDPRIV PYGPFEMAPG AMALHYGQSI FEGAKAFMHE DGEIYTFRIN KNAERMNRSA DIVCIPNIDE QMQIDAINAL IDVDRLWFPM QEGACLYIRP FIFATEDRLS VSPSTRYTFC VVLSPSGAYY AAGVNKGIRL LISKTYHRAV SGGTGASKAA GNYAASLRAG KAAAQFGASQ VLYLDANNQQ IEEAGAMNHF HILKDGTVII PTFTDTILKS ITSQSIMELG ELLGCEVRQE TVMLDKFIAD IESGEIIEAG GFGTAAVVSA VGSYIFEDGR VVTVGNGEVG EHIQRIYKLY TDIQKGHIQG PDGWVKRVER VAP
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