| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3632 |
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| Symbol | |
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| ID | 4254196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4341210 |
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| End bp | 4342403 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638120275 |
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| Product | methylitaconate delta2-delta3-isomerase |
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| Protein accession | YP_735753 |
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| Protein GI | 113971960 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGA ATCCGTTTCC GCCCCAAATT AAAGTTGCCG CCACCTATAT GCGCGGCGGC
ACCAGTAAAG GGGTGTTTTT CCGTTTACAG GACTTACCCG AAGCAGCCCA AGTTCCCGGC
CCAGCTCGAG ATGCCCTGCT CCTTCGCGTG ATTGGCAGCC CCGACCCCTA TGGCAAGCAA
ATTGATGGCA TGGGCGGCGC CACCTCAAGC ACCAGCAAAA CAGTTATTCT GTCGAAAAGC
AGCCAAGCCG ACCACGATGT CGACTATCTA TTTGGCCAAG TCTCTATCGA CAAACCCTTT
GTGGATTGGA GCGGTAACTG CGGCAACTTA ACCGCTGCAG TGGGCGCTTT TGCTATCAGC
AATGGGCTGA TTGACTCTAC GCGCATTCCG CAAAACGGCC TCTGCACAGT GCGTATTTGG
CAGGCCAATA TTGGCAAAAC CATTATTGCC CATGTCCCAA TTACCGATGG CATAGTGCAA
GAGACCGGTG ATTTTGAGCT GGATGGCGTG ACCTTCCCCG CCGCCGAAGT GCAAATCGAA
TTTATGAACC CCGCCGCTGA CGAAGACGGC GATGGTGGCA GCATGTTCCC CACGGGTAAC
TTAGTGGATG TGCTCGAAGT GCCTGGTGTT GGTAACTTTA ATGCGACCAT GATTAACGCG
GGAATTCCGA CCATCTTTAT CAATGCCGAG GACTTAGGTT ACACGGGCAC TGAGCTGCAG
GACGATATCA ACAGCGATAA TGCCGCTTTA GCCAAGTTTG AAACCATTCG TGCCCACGGC
GCGGTGCGTA TGGGGCTTAT CAAGCATATT GATGAAGCCG CATCACGCCA ACATACGCCT
AAGGTGGCCT TTGTTGCTAA GCCGAAAAAC TATGTGTCAT CCAGTGGAAA AGCCGTAGCG
GCAGAGGAGA TCGATCTGCT GGTACGCGCC CTCTCCATGG GCAAATTACA CCATGCGATG
ATGGGCACAG CCGCCGTGGC GATTGGCACA GCGGCGGCGA TTCCCGGCAC TTTAGTCAAT
CTCGCAGCAG GCGGTGGCGA GAAGGAAGCG GTACGTTTTG GCCATCCTTC AGGCACTCTT
CGCGTCGGCG CTCAGGCCAT GCAAGTAAAC GGTGAATGGA CTGTCGTCAA AGCCATTATG
AGCCGCAGTG CCCGCGTGCT GATGGAAGGC TTTGTGCGCG TACCAACGGC TTAA
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| Protein sequence | MSKNPFPPQI KVAATYMRGG TSKGVFFRLQ DLPEAAQVPG PARDALLLRV IGSPDPYGKQ
IDGMGGATSS TSKTVILSKS SQADHDVDYL FGQVSIDKPF VDWSGNCGNL TAAVGAFAIS
NGLIDSTRIP QNGLCTVRIW QANIGKTIIA HVPITDGIVQ ETGDFELDGV TFPAAEVQIE
FMNPAADEDG DGGSMFPTGN LVDVLEVPGV GNFNATMINA GIPTIFINAE DLGYTGTELQ
DDINSDNAAL AKFETIRAHG AVRMGLIKHI DEAASRQHTP KVAFVAKPKN YVSSSGKAVA
AEEIDLLVRA LSMGKLHHAM MGTAAVAIGT AAAIPGTLVN LAAGGGEKEA VRFGHPSGTL
RVGAQAMQVN GEWTVVKAIM SRSARVLMEG FVRVPTA
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