Gene Shewmr4_3627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3627 
Symbol 
ID4254191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4334490 
End bp4334954 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content55% 
IMG OID638120270 
Producthypothetical protein 
Protein accessionYP_735748 
Protein GI113971955 
COG category[S] Function unknown 
COG ID[COG1683] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAAA TCCTCATTAG CAGTTGTTTG CTCGGGCAGG CGGTACGTTA TGACGGTGGC 
CATAATCTGC TGCAAGACGA GTGGATGCAG CGATGGCAGC GGGAAGGTCG TATCGTGGCA
TTTTGTCCCG AATGCGCGGG CGGATTACCC ACACCAAGGC CCGCGGCCGA GCGTGTCGGC
GAGGCAGTGC TAACGGCGCA GGGGGAGGAT GTGACTGCGG CCTTTCGGTT GGGAGCACAA
AAGGCGCTTG CTCTGGCTCA GGAGCAAGGT ATTAAGATTG CGATTTTAAA GGCGCGTAGT
CCTTCCTGTG GCAATCAACA TATTTATGAT GGCACTTTCA GTAAACGTTT AATCGCAGGG
CAAGGAATGA CGGCGGAATT ACTGCGGGCG GCGGGTGTGA GTGTGTTTAA TGAAACGGAA
TTAGCGCAAG CGGCAACGAG GTTGGCGCTG CTTGAGGCGG AATAA
 
Protein sequence
MEKILISSCL LGQAVRYDGG HNLLQDEWMQ RWQREGRIVA FCPECAGGLP TPRPAAERVG 
EAVLTAQGED VTAAFRLGAQ KALALAQEQG IKIAILKARS PSCGNQHIYD GTFSKRLIAG
QGMTAELLRA AGVSVFNETE LAQAATRLAL LEAE