Gene Shewmr4_3626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3626 
Symbol 
ID4254190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4333512 
End bp4334453 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content50% 
IMG OID638120269 
Productputative acyltransferase 
Protein accessionYP_735747 
Protein GI113971954 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATT TCCTTCCCGG CCCAGTGCTG TTTATTCTCA GTCTGAGCCT GCTGATCATT 
AACACCGCCC TTTGGGGAAC CTTGGTTTGC CTCGGTGGTG TAGTGAAAAT GCTGATGCCA
GCTCAAAGTG CACGCAACGC AGTGACCGCA CTGATGAACC GTTTTATGTG GGCATGGGCG
AGCTGCAATG GTGGCATTTT ATATTTGATT GCCAAAATTG AGTGGGACAT CCAAGGCCTC
GAAGGATTGG ATAAAAACGG CTGGTACTTG TTAATCAGTA ACCACCTCAG TGGCTTTGAT
ATTGCCGCGC AGACCTACCT GCTGCGTAAC CATATCCCTA TGCTGAAGTT CTTTCTCAAG
AAAGAGTTGA TCTATGTGCC CATTATGGGC CTAGGTTGCT GGGCGCTCGA CATGCCCTTT
ATGGACAGAA CCAGCCCGGC AAAACTCAAG AAAAATCCAA AGCTTAAGGG TAAGGATTTA
GCGACCACTC GCCGCGCCTG TGAAAAGTTT AAAAATATGC CCACCTCGAT CATCAACTAT
GTTGAGGGCA GCCGTTTTAC CGAAGACAAG CGCCAGCGTC AGGATTCACC TTACCGCCAC
TTGCTGCGTC CTAAGGCGGG CGGAATTGCC TTCACCCTGT CGGCCATGGG TGAGCAATTT
ACCAATCTAT TGGATGTAAC CTTAGTGTAT CCCGATGCGC CAGATGATGT GTTATTCGGC
GTGATGAATG GCAAAGTACG GAAGATTGTG GTGCGGGTAC GCGCCTTACC AGTGCCCCAA
GTCGATGCCA CTCGCTACTT TTCAGAATCT GAATATCGGG TCGAGTTTCA GCGTTGGTTA
AACCAAGTTT GGGCCGAGAA AGATGAGCAA ATCGATGCGC TATTACTGCA ACATCGACAG
CTCACGGATA GCGCCACCAG CACCCACACA CAGCTTCACT AA
 
Protein sequence
MLNFLPGPVL FILSLSLLII NTALWGTLVC LGGVVKMLMP AQSARNAVTA LMNRFMWAWA 
SCNGGILYLI AKIEWDIQGL EGLDKNGWYL LISNHLSGFD IAAQTYLLRN HIPMLKFFLK
KELIYVPIMG LGCWALDMPF MDRTSPAKLK KNPKLKGKDL ATTRRACEKF KNMPTSIINY
VEGSRFTEDK RQRQDSPYRH LLRPKAGGIA FTLSAMGEQF TNLLDVTLVY PDAPDDVLFG
VMNGKVRKIV VRVRALPVPQ VDATRYFSES EYRVEFQRWL NQVWAEKDEQ IDALLLQHRQ
LTDSATSTHT QLH