Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3625 |
Symbol | |
ID | 4254189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4332602 |
End bp | 4333504 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120268 |
Product | putative acyltransferase |
Protein accession | YP_735746 |
Protein GI | 113971953 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGACGC TGTTTTCACA ATTAAAAGGC TGCATTGCCT TCTTAGGTTA TGTGGTGAAC ACCTTGTTTT GGGTTATACC CATAGTGCTG GGCAGTTTGA TAAAGCTTAT CCCTCTGCCG CCTTTGAGAA CGGCCATCAG TTACTTTCTC GACTTTTGCG CCAGCGCCTG GATAAGCGTC AATGGTGTGA TTGAACGTGT GCTACACCCT GTAGAAATTG AACTCTCGGG TGAGACTCAA TTCTCGACCA AAGAATGGTA TATGGTGATT GCTAACCATC AGTCTTGGGT GGATATTTTA ATCCTGCAAC GGGTGTTTAA CCGCCGCATT CCCTTCCTGA AGTTCTTCCT CAAACAGGAA CTACTTTATG TACCAGTATT AGGATTGGCG TGGTGGGCAT TAGACTTTCC CTTTATGCGC CGCTATAGCA CATCACAGCT GAAGAAAAAT CCGAAGCTCA AGGGTAAAGA TATTGAAATT ACACGTAAAG CCTGCGCGAA ATTTAAGACA AAGCCCGTCA GTGTGATGAA CTTTGTCGAA GGCACGCGCT TTACTAAGGC GAAACATAAA AAGCAAAACT CACAGTTCCA ACATCTGTTA AAACCTAAAG CGGGTGGCAT GGCCTTCGCG CTATCGGCGA TGGGAGAACA GATCCACAAG TTAGTGGATG TTGCGATTTA CTACCCGGGC CCAGTTCCTA GCTTTTGGGA CTACCTGACA GGCAAGCTGC CAAAGGTTAA AGTACACATT AAAGTGACCG ATATTGCGCC AGGCATGCGT GGCGACTATA TGAACGATCG TGATTTCAAA ATTGGCTTCC AAGAACAGTT GAACGAACTT TGGCTCGCAA AAGATCAAGT GATCAGCCAA CTGGCTGGCC AAGCGGACCA AGAAGTAAGG TAA
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Protein sequence | MGTLFSQLKG CIAFLGYVVN TLFWVIPIVL GSLIKLIPLP PLRTAISYFL DFCASAWISV NGVIERVLHP VEIELSGETQ FSTKEWYMVI ANHQSWVDIL ILQRVFNRRI PFLKFFLKQE LLYVPVLGLA WWALDFPFMR RYSTSQLKKN PKLKGKDIEI TRKACAKFKT KPVSVMNFVE GTRFTKAKHK KQNSQFQHLL KPKAGGMAFA LSAMGEQIHK LVDVAIYYPG PVPSFWDYLT GKLPKVKVHI KVTDIAPGMR GDYMNDRDFK IGFQEQLNEL WLAKDQVISQ LAGQADQEVR
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