Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3620 |
Symbol | |
ID | 4254184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4327934 |
End bp | 4329013 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120263 |
Product | putative signal transduction histidine kinase |
Protein accession | YP_735741 |
Protein GI | 113971948 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAC ACTCAGTGCA AATAGAACAA AAAATCGCAT GGGTTTACCT GATAAACCTA GCGTTTTATC TGATCCCGTT GTTTGTCACG CCCTATCCGA GCTGGCAGAT AGGGCTCATT TTAGCCGTAC TGATTCCCTT TATTTACAGC TACTTTTGGG CCTATCGCTG CCATACTCGA GTGGCTTATC GACCCATCAG CGTCATGCTA TTACTGGCGA TTGCCATAAC GCCCATCAAT CCTGGCTCTA TTTCTCTGTT TACCTTTGCC AGCTTCTTTA TTGGCTTCTT CTATCCACTC AGAGTCAGCA TGCTAAGTTG GTTTGGAATT TTGGCCTTAT TGTTCTTACT CAACCACTTT ATCCAGTTCA ACAATCTGTA TTTCCCACTG TATGGCTCGG CGTTAGTTTT CGGCGTTGGC ATGCTGGGGA TTGCCGAGCA AAAACGTTAT CAGCACAGAT TGAAGGAGCG GCAAAGCGCG CAGGAGATCA GCACCTTAGC GACCATGGTT GAACGGGAGC GCATCGCCAG AGACTTACAC GATATCATGG GGCACAGCCT GTCATCGATT GCCCTAAAAG CTGAACTGGC GGAAAAACTG CTCGCCAAAC AAGAATATCA ATTAGCGACC ACTCAGCTGC AGGAGCTAGG ACAAATCGCT CGGGAGAGCT TGAGCCAAAT TAGGCATACA GTCTCAGATT ATAAACATAA AGGGCTGGCC AGCTGCGTCA CTCAATTATG TCACTCCCTG AGGGACAAAG GCATCGCGGT GGAGCTGCTA GGCGAGTTAC CCAAATTGTC CGCCAGAGCA GAGAGTCAAC TCGGTTTAGT GTTAACTGAG CTCGTGAATA ATATTCTGCG CCACAGCAGC GCCAGCCAAT GCCGCATTCA GTTTCGCGAG CAGGCCGATA GCCTTATCGT CGACGTGCAA GATAACGCCC CGGCAAGCCC TATTATCGAG GGTAATGGCC TAACAGGGAT CCGCGAGCGG CTCGCTAGCC TTGGGGGACA TTTAAGCTAT GATCTTGAAC AGGGATACGC CTTTAGCGTC AGTTTACCTT TGCTGGGAGC AACAGATTAA
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Protein sequence | MTQHSVQIEQ KIAWVYLINL AFYLIPLFVT PYPSWQIGLI LAVLIPFIYS YFWAYRCHTR VAYRPISVML LLAIAITPIN PGSISLFTFA SFFIGFFYPL RVSMLSWFGI LALLFLLNHF IQFNNLYFPL YGSALVFGVG MLGIAEQKRY QHRLKERQSA QEISTLATMV ERERIARDLH DIMGHSLSSI ALKAELAEKL LAKQEYQLAT TQLQELGQIA RESLSQIRHT VSDYKHKGLA SCVTQLCHSL RDKGIAVELL GELPKLSARA ESQLGLVLTE LVNNILRHSS ASQCRIQFRE QADSLIVDVQ DNAPASPIIE GNGLTGIRER LASLGGHLSY DLEQGYAFSV SLPLLGATD
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