Gene Shewmr4_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3620 
Symbol 
ID4254184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4327934 
End bp4329013 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content49% 
IMG OID638120263 
Productputative signal transduction histidine kinase 
Protein accessionYP_735741 
Protein GI113971948 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC ACTCAGTGCA AATAGAACAA AAAATCGCAT GGGTTTACCT GATAAACCTA 
GCGTTTTATC TGATCCCGTT GTTTGTCACG CCCTATCCGA GCTGGCAGAT AGGGCTCATT
TTAGCCGTAC TGATTCCCTT TATTTACAGC TACTTTTGGG CCTATCGCTG CCATACTCGA
GTGGCTTATC GACCCATCAG CGTCATGCTA TTACTGGCGA TTGCCATAAC GCCCATCAAT
CCTGGCTCTA TTTCTCTGTT TACCTTTGCC AGCTTCTTTA TTGGCTTCTT CTATCCACTC
AGAGTCAGCA TGCTAAGTTG GTTTGGAATT TTGGCCTTAT TGTTCTTACT CAACCACTTT
ATCCAGTTCA ACAATCTGTA TTTCCCACTG TATGGCTCGG CGTTAGTTTT CGGCGTTGGC
ATGCTGGGGA TTGCCGAGCA AAAACGTTAT CAGCACAGAT TGAAGGAGCG GCAAAGCGCG
CAGGAGATCA GCACCTTAGC GACCATGGTT GAACGGGAGC GCATCGCCAG AGACTTACAC
GATATCATGG GGCACAGCCT GTCATCGATT GCCCTAAAAG CTGAACTGGC GGAAAAACTG
CTCGCCAAAC AAGAATATCA ATTAGCGACC ACTCAGCTGC AGGAGCTAGG ACAAATCGCT
CGGGAGAGCT TGAGCCAAAT TAGGCATACA GTCTCAGATT ATAAACATAA AGGGCTGGCC
AGCTGCGTCA CTCAATTATG TCACTCCCTG AGGGACAAAG GCATCGCGGT GGAGCTGCTA
GGCGAGTTAC CCAAATTGTC CGCCAGAGCA GAGAGTCAAC TCGGTTTAGT GTTAACTGAG
CTCGTGAATA ATATTCTGCG CCACAGCAGC GCCAGCCAAT GCCGCATTCA GTTTCGCGAG
CAGGCCGATA GCCTTATCGT CGACGTGCAA GATAACGCCC CGGCAAGCCC TATTATCGAG
GGTAATGGCC TAACAGGGAT CCGCGAGCGG CTCGCTAGCC TTGGGGGACA TTTAAGCTAT
GATCTTGAAC AGGGATACGC CTTTAGCGTC AGTTTACCTT TGCTGGGAGC AACAGATTAA
 
Protein sequence
MTQHSVQIEQ KIAWVYLINL AFYLIPLFVT PYPSWQIGLI LAVLIPFIYS YFWAYRCHTR 
VAYRPISVML LLAIAITPIN PGSISLFTFA SFFIGFFYPL RVSMLSWFGI LALLFLLNHF
IQFNNLYFPL YGSALVFGVG MLGIAEQKRY QHRLKERQSA QEISTLATMV ERERIARDLH
DIMGHSLSSI ALKAELAEKL LAKQEYQLAT TQLQELGQIA RESLSQIRHT VSDYKHKGLA
SCVTQLCHSL RDKGIAVELL GELPKLSARA ESQLGLVLTE LVNNILRHSS ASQCRIQFRE
QADSLIVDVQ DNAPASPIIE GNGLTGIRER LASLGGHLSY DLEQGYAFSV SLPLLGATD