| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3619 |
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| Symbol | |
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| ID | 4254183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4327146 |
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| End bp | 4327850 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120262 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_735740 |
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| Protein GI | 113971947 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAT TCTTACTGTT ATCAAGCCTT GCCCTCGCCT GCGCGCCCGT ATTCGCGGCT
TCCAACTCGA GCTCAAAGAT CGCTGCAATA GACAAAGCTG CAAGCACCTT AAATATCGAT
AAATTACAAC AGCTCAGCAC GACAACATCG GATTACGAAG CAGCCTATGC CAACTATCGT
TTAGCCATCA GCGCCAATGT GATGGGACAA AAAACCTTGG CGGAACAGGC CTTAACTTCG
GCGCAAACTA GCTTAGAAGC CCTCAAAAAT ACCCAAGCCG ATGCCGAATC CCTCGCGTTA
TTATCGTCCG TTTACGGCAT GCAAATCGCC TTGGATAACA GCAAAGGCGC CAAGCTTGGA
AGCAAATCCG CCAATGCCAT CGCTCAAGCC GAACAGCTGG CACCGCTTAA CCCGCGGGTG
GCATTAGTAA AAGCGATTGC CGCCTATAAT ACGCCCGCCA TGTTTGGTGG CAGCATGCAA
CATGCTAAGA CGCTCGCCAG CAGCGCTATT GAACGGTTTA ATCAACCTTG CGAGGACATT
TGCTGGGGTG AGGCCGAAGC TTACACTTGG CGCGGACTCG CAAAACAGGA ATTAGGCGAC
GCCCAAGGGG CGATTGAAGA TTGGCAACAG GCGCTGCAAG TGGAAAAAGA TTATGGTTGG
GCTAAGTTTT TACTTCAGCA AAATCAGCAA ATAAGTGCAA AATAA
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| Protein sequence | MKTFLLLSSL ALACAPVFAA SNSSSKIAAI DKAASTLNID KLQQLSTTTS DYEAAYANYR
LAISANVMGQ KTLAEQALTS AQTSLEALKN TQADAESLAL LSSVYGMQIA LDNSKGAKLG
SKSANAIAQA EQLAPLNPRV ALVKAIAAYN TPAMFGGSMQ HAKTLASSAI ERFNQPCEDI
CWGEAEAYTW RGLAKQELGD AQGAIEDWQQ ALQVEKDYGW AKFLLQQNQQ ISAK
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