| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3615 |
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| Symbol | |
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| ID | 4254179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4321454 |
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| End bp | 4323556 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120258 |
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| Product | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase |
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| Protein accession | YP_735736 |
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| Protein GI | 113971943 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.525735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTATCTGT TTGAAGGTCT AAAGGAGTCT GCTTCCGGTT ACTTAGAACC CGAACAGGTA
GAATTGCTCA AGCAGGCGTA CCAAGTTGCG CGTGATGCCC ATGAAGGTCA AATGCGCACC
AGCGGCGAAC CTTATATTAC CCATCCGGTT GCGGTTGCCC GCATCCTCGC CGAGATGCGT
CTCGATCACG AGACGCTGAT GGCTGCCTTG CTGCACGACA CCATCGAAGA TACCTATGTC
ACCAAAGAGG ACTTGGCCGA ACAATTTGGC GAAGCCGTGG CAGAGTTGGT TGAAGGGGTG
TCTAAGCTCG ACAAGCTGAA ATTTCGCGAT AAAAAAGAAG CCCAAGCGGA AAACTTTCGC
AAAATGATGA TGGCGATGAC GCAGGATATC CGCGTTATTC TCATCAAGCT TGCCGACCGT
ACCCACAACA TGCGTACCTT AGGTGCACTG CGCCCCGATA AACGCCGCCG CATTGCCCGC
GAAACCTTAG AGATTTACGC GCCGATTGCC AACCGACTCG GTATCCACAA TATCAAGACC
GAGTTAGAGG ATTTAGGCTT CCAAGCCTAT TATCCGATGC GCTATCGGGT GTTAAAGGAA
GTGGTCAAAG CTGCCCGTGG TAACCGCAAA GAACTCATCC AAGGCATTGA AGCTGCGGTG
TTAACTCGCC TAAACGATGC GGGCATTAAA GGCAAAGTTA AAGGTCGCGA GAAAAACCTC
TACTCCATCT ACAACAAGAT GCAGAGCAAG GAACTCCAGT TCCAAGAGGT GATGGATATC
TACGCCTTTC GCGTCATCGT CGACTCCATC GATACTTGCT ACCGTGTGCT CGGTGCCATG
CACGGCCTGT ATAAACCGCG TCCGGGTCGC TTTAAAGATT ATATCGCTAT CCCCAAAGCC
AACGGTTATC AGTCGTTACA TACCTCATTA TTCGGCCCAC ACGGCGTGCC CGTCGAGATC
CAAATTCGTA CCGAAGATAT GGATCAAATG GCCGACAAAG GGGTTGCGGC CCACTGGGCT
TACAAAGGCG GCCCCGATGG TCAAGGCACT ACCACGCAAG TGCGTGCCCG CAAGTGGATG
CAAAGCTTGC TGGAACTGCA ACAGAGCGCC AGCACCTCCT TCGAATTCGT GGAAAACGTT
AAAACCGAAC TCTTCCCCGA AGAGATTTAC GTATTCACCC CCGAAGGTCG CATTTTAGAA
TTACCGGTTA ACGCCACCGC CGTCGACTTT GCCTATGAAG TCCACACCGA TGTGGGCAAT
ACCTGTGTCG GCGCCCGTGT TAACCGCCAA GCTTACCCGT TAAGCCAGCC ATTAATCTCC
GGCCAAACCG TTGAGATCAT TACCGCTAAA GGCGCGCGTC CGAATGCCGC TTGGCTTAAC
TTTGTGGTGA CAGGTAAAGC CCGCGCCAAA ATCCGCCAAG TGCTTAAGAG CCTAAAAGCA
GACGATGCTA TCGCCCTTGG CCGCCGTTTG CTTAACCATG CGCTGGGTAA AACCAAACTC
GATAGCATTC CTGCCGAGCA GATTGATAAA GTCGTGCGCG ATACCAAGCA CGCCAATTTA
AATTCCTTAC TCGCCGACAT CGGCCTGGGC AATGCCATGA GCATAGTCAT CGCCCAACGT
TTGATTGGCG ATAATTTAGA GAATCAAGAG AGCCGCGATT CTCACCTGAT GCCAATCCGT
GGCGCCGAAG GTATGTTAGT AACCTTCGCT AACTGTTGCC GCCCCATCCC TGGTGATGCG
GTGATTGCCC ACGTGAGCCA AGGTAAAGGC TTAGTCGTCC ACATGGAAAA CTGCGCTAAC
ATTCGCGGTT ACCAAGGCGA GCCAGATAAA TACATTCCCG TGCAGTGGGA CAATGTCGAA
GGCGTTGAAT ATCAAGCCAA TCTGCGGGTG GAAATTGTTA ACCACCAGGG CGCGCTGGCA
AAGATTACCT CGATTATCGC CGCCGAAGGT TCGAACATTC ACAACCTTAG CACCGAAGAG
CGCGATGGCC GCGTTTACTT GATTAACCTG CGGATTTCGG TGAAGGACAG GATCCATTTA
GCTAACGTGA TGCGCCGTAT CCGGGTACTG CCCGAGGTAT TGCGTACATC ACGTAATCGT
TGA
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| Protein sequence | MYLFEGLKES ASGYLEPEQV ELLKQAYQVA RDAHEGQMRT SGEPYITHPV AVARILAEMR
LDHETLMAAL LHDTIEDTYV TKEDLAEQFG EAVAELVEGV SKLDKLKFRD KKEAQAENFR
KMMMAMTQDI RVILIKLADR THNMRTLGAL RPDKRRRIAR ETLEIYAPIA NRLGIHNIKT
ELEDLGFQAY YPMRYRVLKE VVKAARGNRK ELIQGIEAAV LTRLNDAGIK GKVKGREKNL
YSIYNKMQSK ELQFQEVMDI YAFRVIVDSI DTCYRVLGAM HGLYKPRPGR FKDYIAIPKA
NGYQSLHTSL FGPHGVPVEI QIRTEDMDQM ADKGVAAHWA YKGGPDGQGT TTQVRARKWM
QSLLELQQSA STSFEFVENV KTELFPEEIY VFTPEGRILE LPVNATAVDF AYEVHTDVGN
TCVGARVNRQ AYPLSQPLIS GQTVEIITAK GARPNAAWLN FVVTGKARAK IRQVLKSLKA
DDAIALGRRL LNHALGKTKL DSIPAEQIDK VVRDTKHANL NSLLADIGLG NAMSIVIAQR
LIGDNLENQE SRDSHLMPIR GAEGMLVTFA NCCRPIPGDA VIAHVSQGKG LVVHMENCAN
IRGYQGEPDK YIPVQWDNVE GVEYQANLRV EIVNHQGALA KITSIIAAEG SNIHNLSTEE
RDGRVYLINL RISVKDRIHL ANVMRRIRVL PEVLRTSRNR
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