Gene Shewmr4_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3611 
Symbol 
ID4254175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4317553 
End bp4318434 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content51% 
IMG OID638120254 
Producthypothetical protein 
Protein accessionYP_735732 
Protein GI113971939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1213] Predicted sugar nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG ATTTGACCTT AGTCATTATG GCGGCAGGGC TAGGTAGTCG TTTTGGCGGC 
GATAAACAAT TAGCTTCCCT CGGTCCTGCG GGCGAACCCA TGTTGGTGTT ATCGATACAG
TCGGCGATCC GCAGCGGATT TAAGCGTGCT GTGCTGGTGA TCCGCCCCGA ATTGGAAGCG
GAACTCCACG AGCTGTTGAT ACGCTTTTTG CCAGCGGACT TCGAGTATCA CTTCTGTTAT
CAGTCGCTCA CCGATTTGCC TGCCGAAGCG CAGCTTGCGG ATGTGAGCCA TCGTTTAAAG
CCTTGGGGAA CGGCTCATGC CCTGTGGTGC GCCCGTGATT GTGTTAGTGG GCCAATGGCG
GTGATCAATG CCGATGATTT CTACGGCGAC AGCGCTTTTA TCTCTTTAGC GAAGGGATTA
ACCGCCAGAC CCCATGATTG GATGATGGTG GCTTATCCGA TTGAGCTGAC CTTGTCCGAA
CACGGGGGCG TGAATCGTGG CTTATGCCAA GTGGAGCAGG GGCAACTGCG CTCAGTCGCC
GAATGGTTGA ATATTCAAGC CCAAGATCAT GGTTTTATCG GTGAAGGTCC TGAGGGATTG
GCACCTCTTC CTTCACAGTC TCTGGTCTCT ATGACCTGTT GGGGCTTCTC GCCAAGCATA
TTTGATGTTA TTAAACGTGA ATTAATCGAA TTTATCGAAC AGCAAGGCCA ATTGCCTAAA
TCTGAATGCT ATTTGCCCGC CGTGGTTCAG GCGGGAATTG AGCAAGGTGT GCCCGTGTTT
GTTGATGTGG CCAGCGAACC TTGGCTCGGT GTGACCTATC CGCAGGATAC TGTCTGGGTA
AAGCAAAAAT TAATGGAGTT ATTGAGTGAT AAAACTCATT AG
 
Protein sequence
MNTDLTLVIM AAGLGSRFGG DKQLASLGPA GEPMLVLSIQ SAIRSGFKRA VLVIRPELEA 
ELHELLIRFL PADFEYHFCY QSLTDLPAEA QLADVSHRLK PWGTAHALWC ARDCVSGPMA
VINADDFYGD SAFISLAKGL TARPHDWMMV AYPIELTLSE HGGVNRGLCQ VEQGQLRSVA
EWLNIQAQDH GFIGEGPEGL APLPSQSLVS MTCWGFSPSI FDVIKRELIE FIEQQGQLPK
SECYLPAVVQ AGIEQGVPVF VDVASEPWLG VTYPQDTVWV KQKLMELLSD KTH