| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3607 |
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| Symbol | |
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| ID | 4254171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4313247 |
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| End bp | 4314137 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120250 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_735728 |
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| Protein GI | 113971935 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATT TTTCTGCCCT GCCCATTTTT GTCACTGTAG TGGAATGCGG TAGCTTTTCC
GCCGCAGGAC AAAAACTTGG GCTGAGCAAA TCGGCCATCA GCAAGCGTAT TACGCAACTG
GAGCAACACT TAGGTATTCA GTTGCTACAA CGTACCACTC GCAGTTTGAG CCTGACGGAT
GCTGGCGCAC GCTATTTCGA ATATATTCGC CCCGCAGTGC AGCTCACTCA AGAAGGATTG
GATGCTATCT CCGAGCTGCA GCAAACGCCT AAAGGCAATC TGCGAATTTC CGTGCCTATG
GTGTTTGGCC GCTTGTATAT TGCGCCTTTA ATCGCTGAGT TTTTAAAACG TTACCCCGAT
ATTCAGCTGC AAATGCAAAT GGATGATAAG ACCACTGATT TAATCGCAGG CGGCTTCGAT
CTGGCCATTC GAATTGGCGA GCTTCCTGAC TCCAGCCTTA TCACCCGCAA AATTGCCCCT
TGTTTGAGCG TGATTTGCGC GTCCCCCGCA TATCTAGCTC AGCACGGTTC ACCCATGGTT
CCTCGCGAGC TAACTCAGCA CAACTGCTTG TTTTACAGTT ACTTTCAAGA CGGTGTGGAA
TGGAGTTTCC AGAGTCCCAA TGGCATGCAA CGCATCCAAC CCAAAGGGAA CTATCAAGTA
AATAATAGTG ATGCCATCCA TCGAGCCTGT CTCGATGGTC TTGGCATCGC CAACTTACCA
CTCTTTATTG TTGAATCCGA TCTACAGGCT GGGCGTTTAC AAACGATACT GACTAACTTT
CTACTCCCCG AACATGGTAT TTATGCCGTA TATCCGCAGC GAAAATACCT CCCAACCAAA
GTGAAGGTAT TGATTGATTT TTTACGGGAT AAACTGGCAA ATACCGACTA A
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| Protein sequence | MDHFSALPIF VTVVECGSFS AAGQKLGLSK SAISKRITQL EQHLGIQLLQ RTTRSLSLTD
AGARYFEYIR PAVQLTQEGL DAISELQQTP KGNLRISVPM VFGRLYIAPL IAEFLKRYPD
IQLQMQMDDK TTDLIAGGFD LAIRIGELPD SSLITRKIAP CLSVICASPA YLAQHGSPMV
PRELTQHNCL FYSYFQDGVE WSFQSPNGMQ RIQPKGNYQV NNSDAIHRAC LDGLGIANLP
LFIVESDLQA GRLQTILTNF LLPEHGIYAV YPQRKYLPTK VKVLIDFLRD KLANTD
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