| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3606 |
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| Symbol | |
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| ID | 4254170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4312172 |
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| End bp | 4312888 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120249 |
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| Product | nucleotidase |
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| Protein accession | YP_735727 |
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| Protein GI | 113971934 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02254] HAD superfamily (subfamily IA) hydrolase, TIGR02254 |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCTT TAACCCCGAA TCATGCTGCC GCTTTACCCT ATACTTGGGT GCTTTTCGAT
GCAGATGAAA CTCTCTTTTA TTTCGATGCT TTCGAAGGGC TGAAGCGAAT GTTTTCAGGC
TTTGGCATCG ATTTTACTCG TACCGATTTC GAAGAATATC AAAGTGTAAA CAAGCCGTTA
TGGGTTGCGT ATCAGGATGG CAAGATCAGC GCCGCCGAAC TGCAAACCAT ACGTTTCGAG
CCATGGGCGG CAAAGCTTGC GGTTACCCCG CAAACCTTAA ACAGTGCATT TTTAACGGCG
ATGGCTGAGA TTTGTGCGCC CTTGCCCGGT GCCCGTGAAT TACTGGCCGC ACTGCAGGGA
AAAGCCAAAA TGGGGATCAT CACCAATGGT TTTACCGAGT TGCAAACAGT GCGTTTAGAG
CGTACTGGTT TACAGCATCA TTTTGATATT TTGGTTATTT CAGAAAAAGT GGGCATGGCT
AAACCCGATA TCGGTATCTT TGAACACGCC CTCGAGTTGA TGGGTCAGCC TGCGCGCGAA
CAAGTGTTGA TGGTGGGCGA TAACCCACAT TCAGACATTC AAGGCGGCAT CAATGCGGGA
TTCAACACCT GTTGGTATAA CGTCCATGGA CACGCAGCCC CCGCAGGTAT TCGCCCGCAC
TTTCAAGTCG CCTCCCACCA TGAGCTACAG CAGAAGCTCA TGCCATTACT CGGTTAG
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| Protein sequence | MSSLTPNHAA ALPYTWVLFD ADETLFYFDA FEGLKRMFSG FGIDFTRTDF EEYQSVNKPL
WVAYQDGKIS AAELQTIRFE PWAAKLAVTP QTLNSAFLTA MAEICAPLPG ARELLAALQG
KAKMGIITNG FTELQTVRLE RTGLQHHFDI LVISEKVGMA KPDIGIFEHA LELMGQPARE
QVLMVGDNPH SDIQGGINAG FNTCWYNVHG HAAPAGIRPH FQVASHHELQ QKLMPLLG
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