Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3605 |
Symbol | |
ID | 4254169 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4311249 |
End bp | 4312112 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120248 |
Product | hypothetical protein |
Protein accession | YP_735726 |
Protein GI | 113971933 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCAAA GCATGACAGC CTACGCTCGC ATCGAGCACA AAGCACAATG GGGCACTGCC TCTTGGGAAA TTCGCTCAGT CAACCAGCGT TATCTCGAAA CTTACCTACG TCTGCCAGAA CAATTCCGCA GCTTCGAACC CGTACTGCGC GATCGTCTGC GTAAACGCTT AAGCCGCGGT AAAGTCGAGG TCAATTTACG CTACGAGTTA GCCGACAACA GCAATAACGA ACTCAAATTA AACCAAGGGT TAGCTAAGCA GTTGCTCGAC GCTGCCAGCT GGTTAAAACA AGAAGCCGGC CAAGGCGAAG TCAGCCTAAC TGATATTTTG CGCTGGCCAG GCGTGCTCTC AAGCTCAGAG CAAGATATGG ACGCCATAGG CGCCGAGCTA TTAACGGCTT TCGATTTAGC GATAGACCAG TTTATCGAAG CCCGTGGCCG CGAAGGAGCA GCGATTAAAG ACATGCTGTT AAGCCGTTTA GAAGGCGTCG AAGAACAAAT CGCTATCGTG CGCAAGCACA TGCCTAAAGT GATGGAATAT CAGCGCGATA AACTCACTAA TCGCCTCGCT GAGATCAAAG GTGAACTCGA CCCCGCCCGC ATCGAGCAGG AGATGATCCT GTTAGCACAA AAACAAGATG TGGCCGAAGA GATGGACAGA CTCGAAGCCC ATGTCACCGA AGCGCGCCGC ATCCTCAAAA AAGGCGGCAG CGAAGGCCGC CGCTTAGATT TTATGATGCA GGAATTTAAC CGCGAATCTA ACACCCTCGC CTCAAAATCC ATCAGCACCG AAATCACCGC CGCCGCAGTC GAGCTCAAAG TACTTATCGA ACAAATGCGC GAGCAGATCC AGAACGTTGA ATAG
|
Protein sequence | MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRKRLSRG KVEVNLRYEL ADNSNNELKL NQGLAKQLLD AASWLKQEAG QGEVSLTDIL RWPGVLSSSE QDMDAIGAEL LTAFDLAIDQ FIEARGREGA AIKDMLLSRL EGVEEQIAIV RKHMPKVMEY QRDKLTNRLA EIKGELDPAR IEQEMILLAQ KQDVAEEMDR LEAHVTEARR ILKKGGSEGR RLDFMMQEFN RESNTLASKS ISTEITAAAV ELKVLIEQMR EQIQNVE
|
| |