Gene Shewmr4_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3605 
Symbol 
ID4254169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4311249 
End bp4312112 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content51% 
IMG OID638120248 
Producthypothetical protein 
Protein accessionYP_735726 
Protein GI113971933 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCAAA GCATGACAGC CTACGCTCGC ATCGAGCACA AAGCACAATG GGGCACTGCC 
TCTTGGGAAA TTCGCTCAGT CAACCAGCGT TATCTCGAAA CTTACCTACG TCTGCCAGAA
CAATTCCGCA GCTTCGAACC CGTACTGCGC GATCGTCTGC GTAAACGCTT AAGCCGCGGT
AAAGTCGAGG TCAATTTACG CTACGAGTTA GCCGACAACA GCAATAACGA ACTCAAATTA
AACCAAGGGT TAGCTAAGCA GTTGCTCGAC GCTGCCAGCT GGTTAAAACA AGAAGCCGGC
CAAGGCGAAG TCAGCCTAAC TGATATTTTG CGCTGGCCAG GCGTGCTCTC AAGCTCAGAG
CAAGATATGG ACGCCATAGG CGCCGAGCTA TTAACGGCTT TCGATTTAGC GATAGACCAG
TTTATCGAAG CCCGTGGCCG CGAAGGAGCA GCGATTAAAG ACATGCTGTT AAGCCGTTTA
GAAGGCGTCG AAGAACAAAT CGCTATCGTG CGCAAGCACA TGCCTAAAGT GATGGAATAT
CAGCGCGATA AACTCACTAA TCGCCTCGCT GAGATCAAAG GTGAACTCGA CCCCGCCCGC
ATCGAGCAGG AGATGATCCT GTTAGCACAA AAACAAGATG TGGCCGAAGA GATGGACAGA
CTCGAAGCCC ATGTCACCGA AGCGCGCCGC ATCCTCAAAA AAGGCGGCAG CGAAGGCCGC
CGCTTAGATT TTATGATGCA GGAATTTAAC CGCGAATCTA ACACCCTCGC CTCAAAATCC
ATCAGCACCG AAATCACCGC CGCCGCAGTC GAGCTCAAAG TACTTATCGA ACAAATGCGC
GAGCAGATCC AGAACGTTGA ATAG
 
Protein sequence
MIQSMTAYAR IEHKAQWGTA SWEIRSVNQR YLETYLRLPE QFRSFEPVLR DRLRKRLSRG 
KVEVNLRYEL ADNSNNELKL NQGLAKQLLD AASWLKQEAG QGEVSLTDIL RWPGVLSSSE
QDMDAIGAEL LTAFDLAIDQ FIEARGREGA AIKDMLLSRL EGVEEQIAIV RKHMPKVMEY
QRDKLTNRLA EIKGELDPAR IEQEMILLAQ KQDVAEEMDR LEAHVTEARR ILKKGGSEGR
RLDFMMQEFN RESNTLASKS ISTEITAAAV ELKVLIEQMR EQIQNVE