| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3604 |
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| Symbol | rph |
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| ID | 4254168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4310322 |
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| End bp | 4311035 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120247 |
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| Product | ribonuclease PH |
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| Protein accession | YP_735725 |
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| Protein GI | 113971932 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCCAA GTAACAGAAC GCCAGCACAA ACACGTCCCA TCACTATCAC TCGCCAGTTT
ACGGCCCACG CCGAAGGTTC TGTGTTGGTG GAGTTTGGCG AAACCAAAGT ACTTTGTACC
GCCAGTTTTA CTGAGGGTGT GCCACGTTTC CTTAAAGGTC AGGGACAAGG CTGGGTGACG
GCGGAATACG GTATGTTGCC ACGTTCAACT CACAGTCGTA TGGACCGTGA AGCGGCTCGC
GGCAAGCAAT CTGGTCGTAC TCAAGAGATC CAGCGTCTGA TTGGCCGTGC GCTGCGTGCT
TGCGTCGATA TGAAAGCCCT TGGTGAAAAC ACTATCGTTA TCGATTGTGA CGTGATCCAA
GCCGATGGCG GTACTCGCAC CGCATCTATC ACAGGTGCCT GTGTGGCTCT TGTGGATGCG
CTGAACTGGG CCCGTGGTAA GGGCATCATC AAGTCTAACC CGCTGAAGTT TTTAATTGCT
GCGGTCAGCG TCGGTATCTA CAACGGTGAA GCTATTAGCG ATCTCGAATA TGTGGAAGAC
AGCGCGGCTG AAACCGATAT GAACGTTGTC ATGACGGAAA CCGGTAAGAT TATTGAAATT
CAAGGTACGG CTGAAGGTGA GCCGTTTAGC CATGAAGAAT TGATTGAGCT ACTCGGGTTG
GCGAAGAACA GTATTCGTGA AATCGTCGAT GTGCAGAAAG CCGCATTGAA TTAA
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| Protein sequence | MRPSNRTPAQ TRPITITRQF TAHAEGSVLV EFGETKVLCT ASFTEGVPRF LKGQGQGWVT
AEYGMLPRST HSRMDREAAR GKQSGRTQEI QRLIGRALRA CVDMKALGEN TIVIDCDVIQ
ADGGTRTASI TGACVALVDA LNWARGKGII KSNPLKFLIA AVSVGIYNGE AISDLEYVED
SAAETDMNVV MTETGKIIEI QGTAEGEPFS HEELIELLGL AKNSIREIVD VQKAALN
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