Gene Shewmr4_3591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3591 
Symbol 
ID4254155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4298914 
End bp4299378 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content52% 
IMG OID638120234 
Producthypothetical protein 
Protein accessionYP_735712 
Protein GI113971919 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC CAATTCAAGC CGAAGTACTA AAACGTGTTG CCGAAGTGTT TGACCAGCAC 
GTGCCGTTTC ATAATTTATT GGGGCTGGAT ATCAAGCGCT ACGACATTGA TGGCGTCGAA
GTAGTGATCA ATATGAAGCC AGAGCTCATT GGCAATATTC ATCAACAAAT TCTCCACGGT
GGTGTTACGG CTACAGTGCT CGATGTGGTA GGCGGGCTCA CCGCCTTTGC CGGACTGGTT
GCTAGTCGTG ATGATTGGAC GGTTGAAGAG TTACAGCAAC GGCTGCAAAC CTTAGGCACA
ATCGATATGC GCGTTGATTA CCTGCGCCCC GGGCGTGGAC AGGTTTTCAC TGGCACGGGC
AGCGTGATCC GTGCCGGCAA TCGCGTCTCG GTGTGTCGTA TGGAGCTTCA CAACGAGCAA
GGAACTCATA TCGCCTTCGG CACAGGCACT TATATGGTTG GCTAG
 
Protein sequence
MTNPIQAEVL KRVAEVFDQH VPFHNLLGLD IKRYDIDGVE VVINMKPELI GNIHQQILHG 
GVTATVLDVV GGLTAFAGLV ASRDDWTVEE LQQRLQTLGT IDMRVDYLRP GRGQVFTGTG
SVIRAGNRVS VCRMELHNEQ GTHIAFGTGT YMVG