| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3590 |
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| Symbol | |
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| ID | 4254154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4296813 |
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| End bp | 4298636 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120233 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_735711 |
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| Protein GI | 113971918 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACTC AGTTACTCGA CATACATGAT GATCCGCTGT CACAACGCCT AGCGCAGGTG
TTTGGTTACC GTGACTTTAG GGACGGTCAG CGTGAGGTTA TCGAACGTGT ATGCAGTGGT
GAGGACTGCC TTGTGATCAT GCCCACTGGC GGCGGTAAGA GTCTGTGTTA CCAGTTGCCT
GCACTGCTGA TGCCAGGCAT CACTATCGTG GTATCACCAC TGATTTCATT GATGAAAGAT
CAGGTCGACA GCCTGTTGCA GACGGGGGTC AATGCCGCCT ATTTAAACTC CTCGCAGCCG
CGGGAGCAGA GTGTAGAGGT GCTTAGGCAG TTGCATAGAG GCGAGCTAAA ACTGTTGTAT
GTGTCTCCTG AGCGGTTACT GACGGCCGAT TTTATCGAGC GTATGCGCTC CCTGCCGCTA
TCCATGTTTG CCATTGACGA GGCGCACTGC ATCAGTCAAT GGGGACACGA TTTTCGTCCC
GAATATGCCG CCCTTGGCCA GTTAAAGCAG TTATTTCCCC ATGTGCCTAT GATGGCGCTC
ACCGCCACTG CGGATCAGGC GACACGGCAA AATATTTGCG AGCGCCTAGG GATTAATCCT
TTTAAATTAC TATCGAGTTT CGATCGGCCC AATATTCGCT ATACGGTTGC CGAAAAACTC
AATGCCGCTA ATCAGTTACG ACAGTTTTTA CTGCAGCAAA ATGGCAGCAG TGGCATTGTC
TACTGCAGCA GTCGACGCCG TGTGGATGAG GTGGCTGAAA GACTCACCCT GCAAGGGTTT
CATGCTAAGG CATATCATGC GGGCATGACG CCACAAGAGC GCGGTGAAGT GCAGGATAGC
TTTCTTAAAG ATCAAATTGA TATTGTCGTT GCTACAGTTG CCTTTGGCAT GGGGATTAAC
AAATCCAACG TGCGCTTTGT GGTCCATTAC GATATCCCGA AGAGCATCGA AGCCTATTAT
CAAGAAACTG GCCGAGCGGG CCGCGATGGA CTCGAGGCCG AAGCTTTTAT GCTGTTTGAT
CCTGCCGATA TTGGTCGGGT GCGCCATCTT ATCGAGCAGT CTGAGCCAGG GCCGCAGCAG
CAAGTGGATT TCCATAAACT CAATACCATG GCTGCATTTG CTGAGGCGCA AACCTGTCGC
CGCCAAGTGT TGCTGCATTA CTTCGATGAA AGCGCGTTAG AGCCCTGCGG CAACTGCGAT
ATTTGTCTCG ACCCACCTAA ACGTTATAAC GGCACCGAGG ATGCGCAGAA GGTGCTATCT
TGCATCTATC GGATCGGACA ACGCTTTGGT ATCAATCACT TGATTGAAGT GTTGCGTGGC
TCCAAGGGCG CTGCAATTGT CGACCGAGGA CACGATAAAC TCAGCACTTG GGGCATAGGC
AAAGACAAAA GCCATGAATA TTGGTTGAGT GTTATTCGTC AGCTCATCCA TTTGGGGCTG
GCGAGCCAAG ATATTACTCG GGGCTCATCC ATCACCTTAA ACCCTTCGGC CAGACCGATC
CTTAAGGGCG AGGTGGCGCT AATGTTGGCA GAGCCGCGTA TTCAACTGAC GAACATTAAG
CGCAAAGTCA CTCAATCGCG GGCACCGCTG AATTACGACC GCAAACTGTT TGCGAGGCTA
AAAGCCCTAC GTCGCACCAT TGCCGAGGAG CAGGATGTGC CGCCATATTT GGTGTTTAAC
GATGCGACCT TAGCGGAAAT GGCGGCCATG ATGCCTACCA GCCCCGGTGA AATGCTGGCT
GTTAACGGGG TCGGTGAGCG CAAACTCAGC CGATTTGGCG ACGATTTCCT TGATGAGATA
GCCGCTTATT TAGCGGGGGA ATAA
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| Protein sequence | METQLLDIHD DPLSQRLAQV FGYRDFRDGQ REVIERVCSG EDCLVIMPTG GGKSLCYQLP
ALLMPGITIV VSPLISLMKD QVDSLLQTGV NAAYLNSSQP REQSVEVLRQ LHRGELKLLY
VSPERLLTAD FIERMRSLPL SMFAIDEAHC ISQWGHDFRP EYAALGQLKQ LFPHVPMMAL
TATADQATRQ NICERLGINP FKLLSSFDRP NIRYTVAEKL NAANQLRQFL LQQNGSSGIV
YCSSRRRVDE VAERLTLQGF HAKAYHAGMT PQERGEVQDS FLKDQIDIVV ATVAFGMGIN
KSNVRFVVHY DIPKSIEAYY QETGRAGRDG LEAEAFMLFD PADIGRVRHL IEQSEPGPQQ
QVDFHKLNTM AAFAEAQTCR RQVLLHYFDE SALEPCGNCD ICLDPPKRYN GTEDAQKVLS
CIYRIGQRFG INHLIEVLRG SKGAAIVDRG HDKLSTWGIG KDKSHEYWLS VIRQLIHLGL
ASQDITRGSS ITLNPSARPI LKGEVALMLA EPRIQLTNIK RKVTQSRAPL NYDRKLFARL
KALRRTIAEE QDVPPYLVFN DATLAEMAAM MPTSPGEMLA VNGVGERKLS RFGDDFLDEI
AAYLAGE
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