| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3588 |
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| Symbol | |
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| ID | 4254152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4292985 |
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| End bp | 4294553 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120231 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_735709 |
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| Protein GI | 113971916 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACA GAGTAATTAT ATTTGATACC ACCTTACGTG ATGGCGAGCA GGCGTTAGCG
GCAAGCCTGT CGGTCAAAGA AAAGTTACAG ATCGCCATGG CGTTAGAACG TCTCGGTGTG
GATGTGATGG AAGTGGGGTT CCCTGTGTCG TCACCCGGTG ATTTTGAGTC GGTGCAGACC
ATTGCCCGTA CCATCAAAAA TAGCCGTGTA TGCGCCTTAT CTCGCGCACT TGAAAAGGAC
ATCGATGCCG CCGCTCAGGC ATTATCCGTT GCCGAACAGT TCCGTATTCA TACCTTTATC
TCCACCTCCA CTATCCATGT GGAGAGCAAG TTAAAGCGCT CATTCGAGCA AGTGTTGGAG
ATGGCGGTAG GCGCGGTGAA ATATGCCCGC AGGTTCACCG ATGATGTGGA GTTTTCCTGC
GAAGATGCGG GACGCACGCC AATCGATAAT CTGTGCCGTA TGGTGGAAGC GGCGATTCAT
GCTGGCGCTC GCACCATCAA TATCCCTGAT ACCGTGGGTT ACACAGTGCC AAGCGAGTTT
GGTGGCATTA TTCAAACCCT GTTTAATCGC GTACCGAATA TCGACCAAGC CATTATTTCG
GTTCACTGCC ACGATGACTT AGGCATGTCG GTAGCCAATT CGATTACCGC CGTGCAGCAT
GGCGCCCGCC AAATCGAATG TACCATGAAC GGTATTGGTG AGCGTGCGGG TAACTGCTCC
CTAGAAGAAA TCGCCATGAT CTTAGCAACG CGTAAGAATC TGTTGGGAGT TGAAACTGGG
ATCAATGCTA AGGAGATCCA CCGCACGTCG AATCTCGTCA GCCAGTTATG CAATATGCCG
ATCCAGTCGA ATAAGGCGAT TGTGGGGGCC AATGCCTTTA CTCACTCTTC AGGTATTCAC
CAAGATGGCA TGTTAAAGGC GCAAAATACC TATGAAATCA TGACGCCAGA GAGTATCGGC
CTAAACCGAA ACAACCTGAA TATGACCTCG CGCTCCGGCC GCCATGTGAT TAAGCATCGC
ATGGAGGAAA TGGGCTACAG TGAGCAGGAT TACAATCTGG ACGCCCTCTA CGAACAGTTT
TTACATTTGG CGGATAAAAA GGGCCAAGTC TTCGATTACG ACTTAGAAGC CTTAGCCTTT
ATGGAAGCGC AAGCGGCGGA AGATAACTTC TATCAATTAC AGCAGTTAGT GGTGCAGTCC
GACTCCACCG AAGGCGTTGC TACGGCAACA GTGCGCATCG ATGTCGGCGG TGAAATTAAA
ACCGAAGCCG CGACTGGTAA TGGTCCCGTC GATGCTGCCT ATAACGCCAT TGCCCGTGCG
ACGGACCGTC GTATCGATAT CATTAGCTAC AAATTGGGCG CCAAGGGCGA GGGGCAAAAT
GCCTTGGGCC AAGTCGACAT TACCGCGGTT TACCATGAGC AAAATTTCCA CGGTGTCGGG
TTAGCGACCG ACGTGGTTGA GGCATCAGCC CGTGCGTTAG TGCACGTGAT GAACCTGACA
TGCCGCGCCG ATAAGGTCGC AGATTACAAG CAGAATATGC ATAAAAACAG AGAGCTGGGC
GGCGTATAG
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| Protein sequence | MSNRVIIFDT TLRDGEQALA ASLSVKEKLQ IAMALERLGV DVMEVGFPVS SPGDFESVQT
IARTIKNSRV CALSRALEKD IDAAAQALSV AEQFRIHTFI STSTIHVESK LKRSFEQVLE
MAVGAVKYAR RFTDDVEFSC EDAGRTPIDN LCRMVEAAIH AGARTINIPD TVGYTVPSEF
GGIIQTLFNR VPNIDQAIIS VHCHDDLGMS VANSITAVQH GARQIECTMN GIGERAGNCS
LEEIAMILAT RKNLLGVETG INAKEIHRTS NLVSQLCNMP IQSNKAIVGA NAFTHSSGIH
QDGMLKAQNT YEIMTPESIG LNRNNLNMTS RSGRHVIKHR MEEMGYSEQD YNLDALYEQF
LHLADKKGQV FDYDLEALAF MEAQAAEDNF YQLQQLVVQS DSTEGVATAT VRIDVGGEIK
TEAATGNGPV DAAYNAIARA TDRRIDIISY KLGAKGEGQN ALGQVDITAV YHEQNFHGVG
LATDVVEASA RALVHVMNLT CRADKVADYK QNMHKNRELG GV
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