Gene Shewmr4_3576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3576 
Symbol 
ID4254140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4279931 
End bp4281682 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content52% 
IMG OID638120219 
Productpeptidoglycan synthetase FtsI 
Protein accessionYP_735697 
Protein GI113971904 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.027197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGGC AAGCAAAAAC CAAACAGGCC AGCAAAAAGC AAAAGCCACA ACTGATCCAC 
TGGCGTTTAT ACGTCGTGGT TGGCTTTGTA TTTGCGATGT TTTCGAGCCT TGTGGGTCGT
GCTGCTTATA TCCAAATTAT CGAGCCCGAT AAGCTGCGTC ACGAGAGTGA CATGCGCACC
CTACGAACCA CCAGTCGTGA GGTGCAGCGT GGCTTAATCA CCGACCGTAA CGGCGATATG
CTGGCGGTGA GTGTGCCGGT GCGTGCCGTG TGGGCCGACC CTAAACAAGT CAATGATAAC
AATGGTTTTA CCGATATGCG CCGCTGGCAA GCGCTGGCGG ACGTATTACA TGAACCCGTG
GAAGATGTGC TCGAAAAGGT GCGCAGCAAT CCAACCAAAC GTTTTACCTA CCTTAAACGC
CAAGTCACAC CTGCGGTGGC AGACTATATC ACTCAGCTTA AATTGCCTGG GGTGTTTTTA
AAATCCGAGT CACGCCGCTA CTACCCTGGT GGTGAGATCA CCGCCCAGCT GATCGGCATT
ACCAATATCG ACGATGTCGG TATTGAAGGT GTCGAAAACG CTTACAACAG TTGGCTTACA
GGTACACCAT CTAAACAAAA AGTGCGTAAA TCTCGCGATG GCCATGTGGT TGAGCGCCTC
GATATCGTTC AGGAAGGTGA GAGTCCAAAC GATCTTGTGT TGAGTATCGA CCAACGTATT
CAGCAACTTG CCTACCGTGA GTTAAAGCGC ACGACTGAGA TGAACCAAGC GACCTCTGGC
TCGATCGTGG TGCTCGATAT TCACACTGGC GAAGTCTTAG CCATGGTGAA TACGCCATCT
TACAACCCCA ACTCGCGCGA CAATCTGCAA ACCTTCAGAA TGCGTAACCG CGCGATGACG
GATACCTTCG AGCCTGGCTC AACCATTAAA CCTTTTGTGG TTGCTGCGGC GTTAGAAGCA
GGCACGGTTA AGTCTACCGA TGTGATCCCA ACCTCTCCGG GATGGATGCG TTTAGGCGGC
CGCCAAGTAC GTGACGCAAC TAACTACGGC GACATGACAC TGGCACGTAT TCTGGCGAAA
TCCAGTAACG TGGGGATCAG TAAACTCGCC CTGTCTATTC CAGTGCAGCA GTTATTAGGC
ACTTATCAAT CCATGGGTTT AGGCAGCTTC TCGGGGATTA ACCTCACGGG TGAAAGCGCA
GGTTTGATCC AAGACCGTCA CCGTTGGTCC GATTTCGAGC GCGCCACTTT ATCTTTCGGC
TACGGCCTAA CGGCGACCAC GCTGCAACTG GCGCGGATGT ACGCCACTTT AGGCAATGGC
GGGACTTTAT ATCCAGTATC GATTTTAAAA CTGAAAAAGC CGCCCGAAGG TGAACGCGTG
ATCTCACAAG AGGTCGCTCA CGATGTGCTG CAAATGATGG TGGGTGTGAC CGAAAAAGGT
GGCACAGGTA CGCTTGCGCA TATCGATGGC TACCCAGTTG CGGGTAAGTC TGGCACCAGC
CGTAAGGCGG TAGCTGGCGG TTATGGTGAT GATTATGTTG CGTTATTTGC TGGTGTCGCG
CCAGTGAATA ATCCCAAACT CGCGATTGTT GTCGTGGTGA ACGAGCCGAA AGGCGATCTC
TATTATGGTG GTTCAGTGGC AGGGCCGGCA TTCGCTAAGG TGATGTCAGG CGCACTGCAA
ATGTTAAATG TCGAACCCAT TTCCGATAAA GAACAGGTGC AATTGGCGGG ACTCGCCGGG
AGAACTGAAT GA
 
Protein sequence
MTRQAKTKQA SKKQKPQLIH WRLYVVVGFV FAMFSSLVGR AAYIQIIEPD KLRHESDMRT 
LRTTSREVQR GLITDRNGDM LAVSVPVRAV WADPKQVNDN NGFTDMRRWQ ALADVLHEPV
EDVLEKVRSN PTKRFTYLKR QVTPAVADYI TQLKLPGVFL KSESRRYYPG GEITAQLIGI
TNIDDVGIEG VENAYNSWLT GTPSKQKVRK SRDGHVVERL DIVQEGESPN DLVLSIDQRI
QQLAYRELKR TTEMNQATSG SIVVLDIHTG EVLAMVNTPS YNPNSRDNLQ TFRMRNRAMT
DTFEPGSTIK PFVVAAALEA GTVKSTDVIP TSPGWMRLGG RQVRDATNYG DMTLARILAK
SSNVGISKLA LSIPVQQLLG TYQSMGLGSF SGINLTGESA GLIQDRHRWS DFERATLSFG
YGLTATTLQL ARMYATLGNG GTLYPVSILK LKKPPEGERV ISQEVAHDVL QMMVGVTEKG
GTGTLAHIDG YPVAGKSGTS RKAVAGGYGD DYVALFAGVA PVNNPKLAIV VVVNEPKGDL
YYGGSVAGPA FAKVMSGALQ MLNVEPISDK EQVQLAGLAG RTE