Gene Shewmr4_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3573 
SymbolmraY 
ID4254137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4275991 
End bp4277073 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID638120216 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_735694 
Protein GI113971901 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGGTGT ATCTGGCCGA GTATTTAACC CGTTTTCATA CTGGGTTTAA CGTATTTTCC 
TATGTGACAT TTCGAGCCAT TTTAGGCTTG TTAACCGCAT TAATGTTTAG TTTATGGTGG
GGTCCTAAAC TGATTGAGCG TTTGCAGTTA ATGCAGATTG GTCAAGTCGT GCGTAACGAC
GGGCCAGAGT CGCATTTCAG TAAACGCGGT ACGCCGACCA TGGGCGGCCT GATGATTTTA
GGCGCCATCT TTATCAGTGT ACTGTTGTGG GGCGATCTCG GTAGCCGTTA TGTGTGGGTG
ATGCTGTTTG TATTAGGCAG CTTCGGCATG ATCGGTTTTA TTGATGATTA CCGCAAAGTC
GTGCGTAAAG ATACTAAGGG ACTGATCGCG CGTTGGAAGT ATATTCTGCA ATCCTTAGCG
GCGTTGATCA TTGCTTTCTT CCTCTACACC ACAGCGTCTA ACCCGGGTGA AACCCAGTTA
GTCGTGCCTT TCTTTAAGGA CGTGATGCCA CAGCTTGGCG CTGTGTTTAT CGTATTGGCT
TACTTTACTA TCGTGGGTTC GAGCAACGCG GTAAACCTAA CCGATGGTCT CGACGGTTTG
GCGATTATGC CAACTGTGAT GGTGGCCGCG GCATTTGCCT TGATTGCGTA TCTGTCTGGC
CATGCTCAGT TTGCTAATTA CCTGCACATT CCGCATTTAC CTGGTTCGGG TGAGCTAGTG
ATCGTCTGTA CTGCGATTGT GGGCGCAGGC TTAGGCTTTT TATGGTTTAA CACTTATCCA
GCACAGGTCT TCATGGGCGA TGTGGGCTCG CTGTCTTTAG GCGCAGCCTT AGGCGCGATT
GCGGTACTGG TTCGCCAAGA AATCCTATTA GTGATTATGG GCGGTGTGTT TGTGATGGAA
ACTGTGTCTG TGATCCTGCA GGTCGGTTCT TACAAGTTAC GTGGCCAGCG CATTTTCCGC
ATGGCGCCTA TCCATCACCA CTATGAGTTA AAGGGTTGGC CTGAACCACG CGTGATTGTC
CGCTTTTGGA TTATCTCGAT TTTCTTAGTG TTACTCGGCT TAGCCACGTT GAAGTTAAGG
TAA
 
Protein sequence
MLVYLAEYLT RFHTGFNVFS YVTFRAILGL LTALMFSLWW GPKLIERLQL MQIGQVVRND 
GPESHFSKRG TPTMGGLMIL GAIFISVLLW GDLGSRYVWV MLFVLGSFGM IGFIDDYRKV
VRKDTKGLIA RWKYILQSLA ALIIAFFLYT TASNPGETQL VVPFFKDVMP QLGAVFIVLA
YFTIVGSSNA VNLTDGLDGL AIMPTVMVAA AFALIAYLSG HAQFANYLHI PHLPGSGELV
IVCTAIVGAG LGFLWFNTYP AQVFMGDVGS LSLGAALGAI AVLVRQEILL VIMGGVFVME
TVSVILQVGS YKLRGQRIFR MAPIHHHYEL KGWPEPRVIV RFWIISIFLV LLGLATLKLR