Gene Shewmr4_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3568 
Symbol 
ID4254132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4270006 
End bp4270755 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content47% 
IMG OID638120211 
Productpolypeptide-transport-associated domain-containing protein 
Protein accessionYP_735689 
Protein GI113971896 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1589] Cell division septal protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00488652 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000422237 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCACAGG TTAATTGGTA CCTGTGGAGC GGAATTGGTT TTTTATGGTT AGTGATAAGT 
AGCTTTGTCT TTGGTGGCTA CCAACTGCAT AAATTTTTAA GTGATGCCAG CACGCTGCCC
ATTGAGGCGG TGGCCATCAA AGGTGAACGG ACTTACACCA CAGATAGAGA TATACAAATT
GCACTACAGG ATTTAATGCA GCGGAGTTTT TTCAGCGCAG ATATCACCTT AGTGCAACAG
GCATTAGAAG CCTTACCTTG GGTGTATCGC GCGTCAGTGA GGCGTGAATG GCCAGCGAAA
CTCAGGGTGT ATTTACAGGA GCAACAACCG GTCGCCCATT GGAATGGTAC CGCTTGGCTC
AATGTGCATG GTGAGGTGTT TGAAGCGCCA TCACATCCTG AGCTAGAGCA TCTGCCTTAT
TTATCTGGGC CAGATGATAT GGGGACCGAA GTGTTAACCG CCTACGCGCA GGTTAACTCG
CTACTGAAGA TTAATGGCTT TACCTTGGCC AATTTGAGTT TGACGCCACG TCATGCGTGG
CACGCGACAC TGGGTAACGG TATTGTTTTA GACCTAGGTC GAGAAGATAA AATGGCAAGG
ATACAAAGGT TTATCACTGT TTATCCGTTA CTGGCGAAAC AAGATAAACC AATTGCCAGA
GTGGATTTGC GCTACGACAC TGGGTTGGCC GTAGGCTGGG GCGATGCACA AACAAGAGAG
CCGATAATTA ATGACCAAAA ACCAAGATAG
 
Protein sequence
MSQVNWYLWS GIGFLWLVIS SFVFGGYQLH KFLSDASTLP IEAVAIKGER TYTTDRDIQI 
ALQDLMQRSF FSADITLVQQ ALEALPWVYR ASVRREWPAK LRVYLQEQQP VAHWNGTAWL
NVHGEVFEAP SHPELEHLPY LSGPDDMGTE VLTAYAQVNS LLKINGFTLA NLSLTPRHAW
HATLGNGIVL DLGREDKMAR IQRFITVYPL LAKQDKPIAR VDLRYDTGLA VGWGDAQTRE
PIINDQKPR