| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3562 |
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| Symbol | |
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| ID | 4254127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4262299 |
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| End bp | 4265025 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120206 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_735684 |
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| Protein GI | 113971891 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000100986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000109112 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTGGTA AATTACTGAC AAAAGTATTT GGTAGTCGCA ACGACCGTAC CCTCAAAGGG
TTACAAAAAG TAGTTAATAA GATTAATGCG CTTGAAGCCG ATTATGAAAA ATTAACCGAT
GAACAGCTTA AGGCGAAAAC CGCCGAGTTC CGCGAGCGTT TAGCGGCCGG AGCTTCGTTA
GAGAGCATTA TGGCGGAAGC CTTCGCGACC GTGCGTGAAG CATCGAAGCG AGTGTTCGAG
ATGCGTCACT TCGACGTGCA GTTACTCGGT GGTATGGTGC TCGACAGTAA CCGCATCGCT
GAAATGCGTA CCGGTGAAGG TAAAACCTTA ACCGCAACTC TGCCAGCCTA TTTAAATGCC
TTAACTGGCA AAGGCGTTCA CGTTATTACC GTCAACGATT ACTTAGCCCG TCGTGACGCG
GAAAATAACC GCCCACTGTT CGAATTCTTA GGCTTAACTG TCGGCATTAA CGTTGCAGGT
TTGGGCCAGC AAGCGAAAAA AGACGCCTAC AACGCCGATA TTACCTACGG TACCAACAAC
GAATTTGGTT TCGACTATCT GCGCGACAAC ATGGCGTTCT CGCCACAAGA GCGTGTTCAA
CGTCCATTGC ACTATGCACT GATCGACGAA GTCGACTCAA TCCTTATCGA TGAAGCCCGT
ACGCCATTGA TTATCTCTGG TGCCGCGGAA GATAGCTCTG AGCTATACAT CAAGATCAAC
ACGCTTATCC CGAATCTTAT CCGTCAAGAT AAAGAAGACT CTGAAGAGTA CGTGGGTGAG
GGTGATTACA GCATCGATGA AAAAGCCAAA CAAGTGCACT TCACCGAGCG TGGCCAAGAG
AAGGTTGAGA ACCTATTGAT TGAGCGCGGC ATGTTAGCCG AAGGCGACTC TCTCTACTCT
GCGGCGAACA TTTCTCTGCT GCACCATGTG AACGCTGCGC TGCGTGCTCA TACTCTGTTT
GAACGCGATG TCGACTATAT CGTTCAAGAT GGCGAAGTGA TCATCGTAGA CGAACACACT
GGTCGTACTA TGCCTGGTCG TCGTTGGTCA GAAGGCTTAC ACCAAGCCGT TGAAGCCAAA
GAAGGCGTGC GTATCCAAAA CGAAAACCAA ACGCTGGCAT CGATTACCTT CCAAAACTAC
TTCCGTTTAT ATGAGAAGTT AGCGGGTATG ACAGGTACAG CCGATACCGA GGCGTTCGAG
TTCCAACACA TCTATGGTTT AGATACTGTG GTTGTGCCTA CGAACCGTCC AATGGTTCGT
AAGGATATGG CCGATCTGGT TTACCTCACA GCCAATGAAA AATACCAAGC AATTATTAAA
GACATTAAAG ACTGCCGTGA ACGTGGCCAG CCAGTATTGG TGGGTACGGT TTCCATCGAA
CAGTCTGAAC TGTTAGCGCG TTTGATGGTG AAGGAGAAGA TCCCACACCA AGTGCTTAAC
GCTAAGTTCC ACGAAAAAGA AGCCGAAATT GTTGCTCAAG CGGGTCGTAC TGGCGCCGTG
ACGATTGCGA CTAACATGGC GGGTCGTGGT ACCGACATCG TGTTAGGTGG CAACTGGAAT
ATGGAAATCG AAGCCCTCGA GAATCCAACA GCAGAGCAAA AAGCTAAAAT CAAGGCTGAC
TGGCAAGAGC GCCACGATGC CGTGGTCGCC GCTGGTGGTT TACACATCTT AGGTACTGAG
CGCCACGAAT CTCGCCGTAT CGATAACCAG CTACGTGGTC GTGCGGGTCG TCAAGGTGAC
GCGGGTTCTT CACGTTTCTA CCTTTCTATG GAAGATAGCT TAATGCGCAT CTTCGCCTCG
GATCGTGTCT CTGGCATGAT GAAGAAACTG GGCATGGAAG AAGGCGAAGC AATCGAGCAT
CCATGGGTTT CCCGTGCGAT TGAAAATGCT CAGCGTAAAG TGGAAGCGCG TAACTTTGAT
ATTCGTAAGC AACTGCTCGA ATTTGACGAC GTCGCAAACG ACCAACGTCA AGTGGTTTAC
GCACAGCGTA ACGAGTTGAT GGATGCCGAA AGTATCGAAG ACACCATCAA GAACATCCAA
GACGATGTGA TCAGTGCGGT GATCGATCAA TACATTCCAC CTCAATCAGT GGAAGAGTTA
TGGGATGTGC CAGGATTAGA GCAACGTTTA CAGCAAGAAT TTATGCTAAA ACTGCCAATC
CAAGAATGGC TAGATAAAGA AGACGACTTA CACGAAGAAA CATTGCGTGA GCGTATCATC
ACTTCTTGGT CTGATGCGTA TAAAGCAAAA GAAGAAATGG TCGGTGCACC AGTACTGCGC
CAGTTTGAAA AAGCCGTGAT GCTACAAACC CTCGATGGTC TATGGAAAGA ACACTTAGCG
GCAATGGATC ACTTACGCCA AGGTATCCAC TTACGTGGTT ACGCGCAGAA GAATCCAAAG
CAAGAATATA AGCGCGAGTC TTTCGAGCTG TTCCAGCAAT TACTGTCGAC CTTAAAGCAT
GACGTCATTA GTGTGCTATC TAAGGTACAA GTACAAGCAC AGTCAGACGT AGAAGAGATG
GAAGCTCGTC GTCGTGAAGA AGATGCCAAG ATCCAACGCG ACTATCAGCA CGCAGCTGCC
GAAGCCTTAG TAGGTGGGGA TGATGGTAGC GACGAGATGA TGGCTCACAC GCCAATGATC
CGCGATGGCG ATAAAGTGGG TCGTAACGAT CCTTGTCCTT GTGGCTCAGG CCGTAAGTAT
AAGCAGTGTC ACGGCAAGCT AAGCTAA
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| Protein sequence | MFGKLLTKVF GSRNDRTLKG LQKVVNKINA LEADYEKLTD EQLKAKTAEF RERLAAGASL
ESIMAEAFAT VREASKRVFE MRHFDVQLLG GMVLDSNRIA EMRTGEGKTL TATLPAYLNA
LTGKGVHVIT VNDYLARRDA ENNRPLFEFL GLTVGINVAG LGQQAKKDAY NADITYGTNN
EFGFDYLRDN MAFSPQERVQ RPLHYALIDE VDSILIDEAR TPLIISGAAE DSSELYIKIN
TLIPNLIRQD KEDSEEYVGE GDYSIDEKAK QVHFTERGQE KVENLLIERG MLAEGDSLYS
AANISLLHHV NAALRAHTLF ERDVDYIVQD GEVIIVDEHT GRTMPGRRWS EGLHQAVEAK
EGVRIQNENQ TLASITFQNY FRLYEKLAGM TGTADTEAFE FQHIYGLDTV VVPTNRPMVR
KDMADLVYLT ANEKYQAIIK DIKDCRERGQ PVLVGTVSIE QSELLARLMV KEKIPHQVLN
AKFHEKEAEI VAQAGRTGAV TIATNMAGRG TDIVLGGNWN MEIEALENPT AEQKAKIKAD
WQERHDAVVA AGGLHILGTE RHESRRIDNQ LRGRAGRQGD AGSSRFYLSM EDSLMRIFAS
DRVSGMMKKL GMEEGEAIEH PWVSRAIENA QRKVEARNFD IRKQLLEFDD VANDQRQVVY
AQRNELMDAE SIEDTIKNIQ DDVISAVIDQ YIPPQSVEEL WDVPGLEQRL QQEFMLKLPI
QEWLDKEDDL HEETLRERII TSWSDAYKAK EEMVGAPVLR QFEKAVMLQT LDGLWKEHLA
AMDHLRQGIH LRGYAQKNPK QEYKRESFEL FQQLLSTLKH DVISVLSKVQ VQAQSDVEEM
EARRREEDAK IQRDYQHAAA EALVGGDDGS DEMMAHTPMI RDGDKVGRND PCPCGSGRKY
KQCHGKLS
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