| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3558 |
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| Symbol | |
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| ID | 4254123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4246347 |
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| End bp | 4247150 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120195 |
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| Product | Sec-independent protein translocase TatD |
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| Protein accession | YP_735680 |
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| Protein GI | 113971887 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCTT ATATAGATAT CGCTGTCAAC TTGCTTGGCA GCGCACTCGA ACCAGACATA
GCGCAAATCG TACAAGCAGC GGCGGACCAA GGGGTTTCGC CGTTAATTGT TATTGGCAGC
GATTTAACTG AAAGCGCCGC CGCCATTCAA TTATGCCAAC AGTATCCCAA ACAGCTTTAC
TGCACCGCAG GCGTACATCC CCACCACGCT AGCGAATGGC AAGCAGACTC CAAACAGTTA
CAAACAAACC TGTGCCAAGC GCCACAAGTC GTTGCTGTCG GTGAATGTGG ACTCGATTAC
AACCGAGACT TCTCCCCTCG CCCAGCCCAG CGCCAAGCGT TTATCGACCA ACTCGAACTC
GCAGTTGAAC TCAAAAAACC GGTACTCATG CATGAACGAG ATGCCCACGA TGATTTTTTG
AGTATTGTTA AAGAATACCG CCCTCATCTC AGCGGAGCAT TACTGCATTG CTTTACAGGC
ACCCGGGCTC AGATGGAAGC CTATATCGAC CTCGATCTAC ATTTGGGTAT TACGGGGTGG
GTATGTGATG AAAGACGCGG CCTAGAGCTA GCCGAGCTGG TTCCATTTAT TCCGAAAGAA
CGTTTATTGA TTGAAACTGA CAGCCCATAT CTGCTGCCAC GCAGTATGCG ACCTAAACCT
AAATCCAGTA AAAACAAACC CGAATACTTG CCCTATATTG CGCAATATAT TGCCAATTTA
CGGGGTGAAA ATTCGGCTGA ATTTGCCAAA CAGTGCTATC AAAATAGCCT CGCCTTTTTT
AATTTGAGTC AAGCTAATGA CTAA
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| Protein sequence | MPSYIDIAVN LLGSALEPDI AQIVQAAADQ GVSPLIVIGS DLTESAAAIQ LCQQYPKQLY
CTAGVHPHHA SEWQADSKQL QTNLCQAPQV VAVGECGLDY NRDFSPRPAQ RQAFIDQLEL
AVELKKPVLM HERDAHDDFL SIVKEYRPHL SGALLHCFTG TRAQMEAYID LDLHLGITGW
VCDERRGLEL AELVPFIPKE RLLIETDSPY LLPRSMRPKP KSSKNKPEYL PYIAQYIANL
RGENSAEFAK QCYQNSLAFF NLSQAND
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