| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3556 |
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| Symbol | |
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| ID | 4254121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4245023 |
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| End bp | 4245772 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638120193 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_735678 |
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| Protein GI | 113971885 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAAC AGCAGCCACT TATCAGCCAT TTGCTTGAAC TTAGGTCCAA GCTGCTTAAA
TCCATTGCCA GTGTGTTATT AGTGTTCATT TGTAGCGTGT ATTGGGCAAA TGATATTTAC
CATTACATGG CAATCCCTTT AATGCAGTCT TTGCCCTTAG GTGGCAGCAT GATTGCGACC
GATGTGGCCG CACCTTTCTT CGCCCCTTTC AAACTAACTT TGGTACTGTC ATTTTTTGTG
GCGGTACCCT ATGTGCTCTA TCAAATTTGG TCCTTCGTCG CACCCGGTTT GTATAAGCAT
GAAAAACGCT TAGTCATGCC GCTACTCTTT AGCAGCACAG TGCTGTTTTA CTTAGGAATA
GCCTTTGCGT ATTACATTGT ATTCCCTGTG GTATTTGGCT TCTTTGCCAA CACAGCCCCC
GAGGGAGTAC AAGTTGCGAC CGATATCAGC AGCTATCTCG ATTTTGTGCT GAAGTTATTT
TTTGCCTTTG GCTTATCCTT TGAAATCCCG GTTGCCGTAG TCCTGCTTTG CTGGGCGGGT
GTAACCACTC CTGAAGATCT CAAACAAAAA CGCCCTTATA TCATTGTCGG CGCATTCGTG
GTCGGTATGC TGTTAACGCC ACCGGATGTT ATATCCCAGA CTATGCTTGC CGTACCAATG
CTGTTATTGT TCGAAGGCGG ATTATTTGCA GCTCGTTTTT ACAGTAAACC TGATGACGAG
ACCGACGAAG AAGAATCAAC GAACGACTAA
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| Protein sequence | MSQQQPLISH LLELRSKLLK SIASVLLVFI CSVYWANDIY HYMAIPLMQS LPLGGSMIAT
DVAAPFFAPF KLTLVLSFFV AVPYVLYQIW SFVAPGLYKH EKRLVMPLLF SSTVLFYLGI
AFAYYIVFPV VFGFFANTAP EGVQVATDIS SYLDFVLKLF FAFGLSFEIP VAVVLLCWAG
VTTPEDLKQK RPYIIVGAFV VGMLLTPPDV ISQTMLAVPM LLLFEGGLFA ARFYSKPDDE
TDEEESTND
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