Gene Shewmr4_3553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3553 
Symbol 
ID4254118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4242604 
End bp4244253 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content48% 
IMG OID638120190 
Product2-octaprenylphenol hydroxylase 
Protein accessionYP_735675 
Protein GI113971882 
COG category[R] General function prediction only 
COG ID[COG0661] Predicted unusual protein kinase 
TIGRFAM ID[TIGR01982] 2-polyprenylphenol 6-hydroxylase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.96851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG CCAGTATCCG CCGCGGTTAT CATGTCATTA AAACCCTACT GCAATATGGG 
TTAGATGACG TATTACCGCC AAAGATGACC CCTTGGTACT TTAAACTCGC CCGCAACAGC
CTGTTTTGGA TCCGCAATAA GCACAAAGGC AAATCCGGTG GCGAGCGTTT AAAGCTGGCG
ATGCAAGAGC TTGGCCCTGT GTATATTAAG CTCGGGCAAA TGCTATCAAC CCGCCGCGAC
TTGCTCAGCG ACGAATGGGC CAATGAACTT GCCATGTTGC AGGATAAAGT CCCGCCCTTC
GATGGCGCCT TGGCACGGCA AGCGATTGAA ACCGAACTTA AAGCCCCCAT CGAGAGCTTC
TTCGACGACT TTAACGAGAC GCCATTAGCC TCAGCTTCGA TTTCTCAGGT GCATACCGCC
ACGCTCAAAT CCAACGGCAA AGCCGTGGTA TTAAAAGTGC TGCGACCGAA TGTGGAAGCT
AAAATCCAAG CCGACTTGTT GTTGATGTCG CAAACGGCTA AGATCATCGA TTATCTCCTC
GGTGAAGGGA ATCGTCTGCG TCCCTCTGAG GTGATTGAAG ATTACCGCGT GACCATTCTA
GGTGAGCTTA ATCTTAAGCT TGAGGCCCTT AATGCCATTA AGCTGCGCAA TAACTTCCTC
GACTCAGACG CGCTCTATAT TCCGTATGTT TACGAAGAGT TTTGCTATCC ACGTTTAATG
GTGATGGAGC GCATTTACGG TATTCCGGTA TCGGATATCG CCGCGCTGAA GGCACAGGGA
ACTAACTTTA AACTCTTGGC TGAGCGTGGC GTAGAGCTGT TTTTCACCCA AGTGTTCCGC
GATAATTTTT TCCATGCCGA TATGCATCCA GGTAATATTT TTATCTCCCG CGATCATCCC
GAGAATCCTT ATTATATCGG CCTAGATTGC GGCATTATGG GCACACTCAG CGAAGTCGAT
AAGCGCTATT TAGCGGAAAA CTTCCTCGCG TTTTTCAACC GTGATTACCA CCGTATCGCG
CAGCTGTATA TCGAGTCGGG TTGGGTATCG GAAAAAACCG ATCTGCAAGC CTTCGAGCAA
GCCATCAAGG TCGTTTGCGA GCCTATGTTT AACAAGCCGT TAGATGAAAT ATCCTTTGGG
CACGTGTTAT TAGAACTGTT CCGCACCGCA CGCCACTTCG ATATCGTCGT ACAGCCTCAG
CTCGTGCTGC TCGAGAAGAC ATTACTGTAC ATCGAAGGCT TAGGACGTCA GCTCTATCCG
CAGCTGGATC TCTGGCAAAC GGCGAAGCCC TTTTTAGAGC AATGGATGGC CGAGCAAGTG
GGCCCCAAGG CAATGTTTAA AAAGGTATCC ACAAAACTGC CATATTGGTC TGATAAGCTT
CCGGAATTCC CTGAGCTAAT TTACGATAAC CTTAAATTAG GCAGGAAATT GCTGAGTTCT
CAGCAACAAA TGCTAGATAA GTATCTGAAA TATCAGCAGC AAGCACACAA GAGTAATTAC
TTGCTCATCA CTTCTGCAAT TTTATTGATC TGCGGCACGT TATTGTTTAA CCAAGACGCT
ACACTGTGGA GCCCTTACGT GTGTCTAATT TCAGGCGCAG CGTTATGGAT TATCGGATGG
CGATCTAGGC CAAAGAATCG TAAATTTTAG
 
Protein sequence
MTLASIRRGY HVIKTLLQYG LDDVLPPKMT PWYFKLARNS LFWIRNKHKG KSGGERLKLA 
MQELGPVYIK LGQMLSTRRD LLSDEWANEL AMLQDKVPPF DGALARQAIE TELKAPIESF
FDDFNETPLA SASISQVHTA TLKSNGKAVV LKVLRPNVEA KIQADLLLMS QTAKIIDYLL
GEGNRLRPSE VIEDYRVTIL GELNLKLEAL NAIKLRNNFL DSDALYIPYV YEEFCYPRLM
VMERIYGIPV SDIAALKAQG TNFKLLAERG VELFFTQVFR DNFFHADMHP GNIFISRDHP
ENPYYIGLDC GIMGTLSEVD KRYLAENFLA FFNRDYHRIA QLYIESGWVS EKTDLQAFEQ
AIKVVCEPMF NKPLDEISFG HVLLELFRTA RHFDIVVQPQ LVLLEKTLLY IEGLGRQLYP
QLDLWQTAKP FLEQWMAEQV GPKAMFKKVS TKLPYWSDKL PEFPELIYDN LKLGRKLLSS
QQQMLDKYLK YQQQAHKSNY LLITSAILLI CGTLLFNQDA TLWSPYVCLI SGAALWIIGW
RSRPKNRKF