Gene Shewmr4_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3552 
Symbol 
ID4254117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4241987 
End bp4242607 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content49% 
IMG OID638120189 
Producthypothetical protein 
Protein accessionYP_735674 
Protein GI113971881 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCCGC AAGAAGTGGT GTTACTTGCC TGCGCCGCCA TTGAGACGGG TCTGAAGCAA 
CTTCAGACCC AAGCTGGCGA CGCCTATGCT CGCCAGCGTC AGTTACATGG CAAAGTCTTT
CGCATTCAGT TATCACAACT CAGCTGGCCA ATTTACTTGG TCTTCGCCAA AGAAATTCAA
GTACTGAGTC GCTATGAAGG CGATGTGGAT GTCAGCCTGC ATGCCGATGC CACAACGCTC
TACCGCGTGA CAGAAGGTGC TAACCTCACC GAACTCATCA AACAGGATAA GCTCAGCCTC
GAAGGTGACC TCAATCTGTT ACAAAGCTTC AGCCATTATC TGCGTAGCAT AGAGTTTGAT
TTTGCCGAGC CACTGTCGCG TTACTTAGGC GATGGGCCAA CCCATAAACT GCTGAGCACG
GGACTACAGG CCAAAAACTT AGCATTTGAA GTGCTGCGTA AGACCCGCTC GCATTTGGGG
CAACTCGCAA TCGAAGAATA TCGCCTTGCG CCACACCGGA TTGAACTCAT TCATTTTCGC
GATCAAATGG ATGATTTAGT TGATGATACT CGAGCGCTCG AACAACGGAT TGCCAAATTA
AGAGATAAAA TTAAGCCATG A
 
Protein sequence
MMPQEVVLLA CAAIETGLKQ LQTQAGDAYA RQRQLHGKVF RIQLSQLSWP IYLVFAKEIQ 
VLSRYEGDVD VSLHADATTL YRVTEGANLT ELIKQDKLSL EGDLNLLQSF SHYLRSIEFD
FAEPLSRYLG DGPTHKLLST GLQAKNLAFE VLRKTRSHLG QLAIEEYRLA PHRIELIHFR
DQMDDLVDDT RALEQRIAKL RDKIKP