| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3551 |
|---|
| Symbol | |
|---|
| ID | 4254116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 4241232 |
|---|
| End bp | 4241987 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638120188 |
|---|
| Product | demethylmenaquinone methyltransferase |
|---|
| Protein accession | YP_735673 |
|---|
| Protein GI | 113971880 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAGG GCGAATCTAA AAATACCCAC TTTGGTTATA AAACCGTAGA GGCGGATAAA
AAGGCCGATC TCGTTGCCGG CGTGTTTCAT TCGGTTGCCG CCAAGTACGA TATCATGAAT
GACGTCATGT CCTTCGGTAT TCACCGTTTT TGGAAGCGTT ACACCATTGA AGTTTCTGGT
GCGCGCCCTG GTATGAAAGT GCTCGACCTT GCGGGTGGGA CTGGCGATTT AACCGCTAAG
TTCTCCCATC TGGTGGGTGA AAAAGGCGAA GTGGTATTAG CGGATATCAA CGATTCTATG
CTGAAAGTGG GCCGCACTAA ACTGCGTGAC CGCGGCATCG TTGGCAATGT GAGCTATGTG
CAAGCCAACG CCGAAGCGCT GCCTTTCCCC GATAACCACT TCGATATCAT CACTATCGCC
TTTGGTCTGC GTAACGTGAC CGATAAAGAC GCGGCGCTGC GTTCAATGAA CCGCGTGCTT
AAGCCAGGCG GTAAGTTATT AGTGTTAGAG TTTTCTAAGC CGCAACACGA GCTGATGCGT
AAAGTCTATG ACTTATACAG CTTTAAAGTG CTGCCGAAAA TGGGTGAGAT TATTACCAAG
GATGCGGATA GCTATGAGTA TTTAGCCGAG TCGATTCGTA TGCACCCAGA CCAAGAGACC
CTCAAGCAAA TGATGGTCGA TGCGGGCTTT GAACAGGTCG ATTACACCAA TATGACCGAC
GGCATTGTTG CCCTGCACCG CGGTTATAAA TTCTAA
|
|---|
| Protein sequence | MSEGESKNTH FGYKTVEADK KADLVAGVFH SVAAKYDIMN DVMSFGIHRF WKRYTIEVSG
ARPGMKVLDL AGGTGDLTAK FSHLVGEKGE VVLADINDSM LKVGRTKLRD RGIVGNVSYV
QANAEALPFP DNHFDIITIA FGLRNVTDKD AALRSMNRVL KPGGKLLVLE FSKPQHELMR
KVYDLYSFKV LPKMGEIITK DADSYEYLAE SIRMHPDQET LKQMMVDAGF EQVDYTNMTD
GIVALHRGYK F
|
|---|
| |