Gene Shewmr4_3547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3547 
Symbol 
ID4254112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4237880 
End bp4238392 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content51% 
IMG OID638120184 
Productphosphoesterase, PA-phosphatase related 
Protein accessionYP_735669 
Protein GI113971876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0785734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTT ACATTACAGA CTTAGATAAG CGCATGTTTT ATCGCATTGT GGGTTTGAGC 
CAACGTCATG GTGTTTATGA TTGGGCGAAG CGGATATCGG CAACTGGGGA TGGGCATGTG
TATCTGTATC TTGCTGTTGG GTTGATGCTG ACACATGCCC AAGGACAGAG CCTGTTCAAT
CTGCTGTTAG CGAGCTTTTT GATTGAATTG CCGCTGTACT TATTACTCAA AAATAGCATT
CGCCGCACTC GCCCCTGCCA CGCCTTAGTT GGGTTTGAAA AGGGATTCGA ACCTTCAGAC
AGATTCAGTC TACCTTCTGG GCACACGGCG GCCGCCTTTG TGATGGCCAC GAGTGTGGCG
CAGGTGTATC CCATCGCCGC CCCTTTTGCC TATGCCTGGG CGTTCAGTAT TGGTGCCTCA
CGCGTTGCGC TAGGGGTGCA TTACCCTTCA GATATTGCTG CTGGCGCCCT GTTAGGTATT
GGGGCAGTGT TGCTGGTACA TCCCGTGATT TAA
 
Protein sequence
MLSYITDLDK RMFYRIVGLS QRHGVYDWAK RISATGDGHV YLYLAVGLML THAQGQSLFN 
LLLASFLIEL PLYLLLKNSI RRTRPCHALV GFEKGFEPSD RFSLPSGHTA AAFVMATSVA
QVYPIAAPFA YAWAFSIGAS RVALGVHYPS DIAAGALLGI GAVLLVHPVI