Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3532 |
Symbol | |
ID | 4254097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4220073 |
End bp | 4221920 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120169 |
Product | hypothetical protein |
Protein accession | YP_735654 |
Protein GI | 113971861 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCC ACTGCGACGC CTCACACTTT ACCCTCTGGT TTGTGAGCCG CGAGCCGTTA AGCGAATTAC AGCTTACCTT AGGGGAGCAA AGTTACCCGT TAACAGAGGA AGAAGTGCAC AGTGTGCAGC TCGGTCAGCA TGCCTTTCAG TATTTACTTC GCCTGTCGCG CCCCGAACTG CTTACGCCCC AAACGATTAC CCAATATCGC GTGTCGGCCA AGGGCATTGA TGACCTATTT AATCATGTCG AAACGTTGGG TTATGGCGAT GCTAACTCGC CCCATCTTTA CTTTAGCCAA ACACTGACAC AGGTATGGCA CGGCTCATGC CGCAATCCCC ATCACCACAG TGAGGATGCT TTAGTCGCCG CCGATACTAA ACTCGCACAG CTTATCGATA AAGGTGCGAA TGAGCGCCCA GCGTTATTGA TGCTCAGCGG CGATCAGGTC TATGTGGATG ATGTGGCGGG CCCTATGCTA TGCGCCATAG GTCAAGTGAT TGAAAAGCTA GGTTTGCACC ATGAAGCCTT CCACGGCGCT AATATTGCGG GAAGCGAGGC CATAAGTTAC CGACCCGAGC ATTTATATTT ACGCCATAAA AATCTGCTGC CACGCACCGA ATATCCCGCC AAAACCGCAC TCTGGCGCTG GTATATCAAT CATCCGATTT TTACCTCATC GATTGCCGAA AACCATTTAG TCAGTCTCAA TGAGATGATT GCCCTGTATC TGCTCACTTG GTCACCCGAA TTATGGGAGC TTATCGACTT ACCCAAGGAG GTTGAGGGAC TCTCGGCGGC GAATCAGCTA CGTTGGCAGC GCGAATGGCA AAATCTATTG GCCTTTAAGG CGGGGCTTAA ACAGGTTAGG CGCCTGATGG CGCATATTCC CGTGTATATG ATGTTCGATG ACCATGACAT CACCGACGAT TGGAACCTCA CCGCCAAGTG GGAGCAGGCG GCCTACGGCC ATGCCTTTTC GAAGCGTATT ATTGGTAATG CTTTGATTGC CTATACCTTA TTCCAAGGGT TAGGCAATAC ACCGAGCCAG TTTGATGCCG AGGTACGGCC GTTATTAGAT GGTTTTTTCG CCCGCCCAGC GCCAGAAGCT CAGGACGCCT TGATTGATGA GTTACTCAAA TTCGAGCAAT GGCATTACAC CTTAGACACC TCACCTAAGC TGGTCGTGTT AGATACCCGC ACCCGCCGCT GGCGCAGTGA ATCCAATCTC GCTAAACCCT CGGGGTTAAT GGATTGGGAA GCCTTGATGG ATTTACAACA AGCGCTGCTC GGCCAATCTA AGGTGATTAT CGTCTCCCCT GCGCCCATGT TTGGGGTCAA GGTGATTGAA GCCGTGCAAC GCATGGCGAC ACTCATGGGC GGCTCACTGC TGGTCGATGC CGAAAACTGG ATGGCACATC CGGGCGCGGC CAATGCCTTG CTGAGCATCT TTATGCACCG CAAGACCCCA GAGCAATTTG TGATCCTCTC GGGGGATGTG CACTACTCCT TCGCCTATGA CATCAGCATT CGCTTTCGCC GTAGCAGCCC GAATATTTAT CAAATTACCT GTAGCGGAAT TAAAAACCAG TTCCCCGAGA AGCTACTGCC GCTTTTCGAC AAGCTCAATG GTTGGCTTTA TGGCCACTTC TCGCCGCTCA ACTTGTTCAC TAAACGCAAG CGAATGTCGC TGCGCGGTAG ACGCCCAAAT GGCGAGCGAA GCAAGCGTTT AGTCAACCGT AGTGGAATAG GGATTTTAGC GTTAGCGGAG GATGGTGAAC CAACAAAAAT CGCTGTTTTA CATGGGGATA TGACCGAGAC TCGGTTCGAA CCACCGAGGC AGGAATAG
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Protein sequence | MLRHCDASHF TLWFVSREPL SELQLTLGEQ SYPLTEEEVH SVQLGQHAFQ YLLRLSRPEL LTPQTITQYR VSAKGIDDLF NHVETLGYGD ANSPHLYFSQ TLTQVWHGSC RNPHHHSEDA LVAADTKLAQ LIDKGANERP ALLMLSGDQV YVDDVAGPML CAIGQVIEKL GLHHEAFHGA NIAGSEAISY RPEHLYLRHK NLLPRTEYPA KTALWRWYIN HPIFTSSIAE NHLVSLNEMI ALYLLTWSPE LWELIDLPKE VEGLSAANQL RWQREWQNLL AFKAGLKQVR RLMAHIPVYM MFDDHDITDD WNLTAKWEQA AYGHAFSKRI IGNALIAYTL FQGLGNTPSQ FDAEVRPLLD GFFARPAPEA QDALIDELLK FEQWHYTLDT SPKLVVLDTR TRRWRSESNL AKPSGLMDWE ALMDLQQALL GQSKVIIVSP APMFGVKVIE AVQRMATLMG GSLLVDAENW MAHPGAANAL LSIFMHRKTP EQFVILSGDV HYSFAYDISI RFRRSSPNIY QITCSGIKNQ FPEKLLPLFD KLNGWLYGHF SPLNLFTKRK RMSLRGRRPN GERSKRLVNR SGIGILALAE DGEPTKIAVL HGDMTETRFE PPRQE
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