Gene Shewmr4_3532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3532 
Symbol 
ID4254097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4220073 
End bp4221920 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content52% 
IMG OID638120169 
Producthypothetical protein 
Protein accessionYP_735654 
Protein GI113971861 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC ACTGCGACGC CTCACACTTT ACCCTCTGGT TTGTGAGCCG CGAGCCGTTA 
AGCGAATTAC AGCTTACCTT AGGGGAGCAA AGTTACCCGT TAACAGAGGA AGAAGTGCAC
AGTGTGCAGC TCGGTCAGCA TGCCTTTCAG TATTTACTTC GCCTGTCGCG CCCCGAACTG
CTTACGCCCC AAACGATTAC CCAATATCGC GTGTCGGCCA AGGGCATTGA TGACCTATTT
AATCATGTCG AAACGTTGGG TTATGGCGAT GCTAACTCGC CCCATCTTTA CTTTAGCCAA
ACACTGACAC AGGTATGGCA CGGCTCATGC CGCAATCCCC ATCACCACAG TGAGGATGCT
TTAGTCGCCG CCGATACTAA ACTCGCACAG CTTATCGATA AAGGTGCGAA TGAGCGCCCA
GCGTTATTGA TGCTCAGCGG CGATCAGGTC TATGTGGATG ATGTGGCGGG CCCTATGCTA
TGCGCCATAG GTCAAGTGAT TGAAAAGCTA GGTTTGCACC ATGAAGCCTT CCACGGCGCT
AATATTGCGG GAAGCGAGGC CATAAGTTAC CGACCCGAGC ATTTATATTT ACGCCATAAA
AATCTGCTGC CACGCACCGA ATATCCCGCC AAAACCGCAC TCTGGCGCTG GTATATCAAT
CATCCGATTT TTACCTCATC GATTGCCGAA AACCATTTAG TCAGTCTCAA TGAGATGATT
GCCCTGTATC TGCTCACTTG GTCACCCGAA TTATGGGAGC TTATCGACTT ACCCAAGGAG
GTTGAGGGAC TCTCGGCGGC GAATCAGCTA CGTTGGCAGC GCGAATGGCA AAATCTATTG
GCCTTTAAGG CGGGGCTTAA ACAGGTTAGG CGCCTGATGG CGCATATTCC CGTGTATATG
ATGTTCGATG ACCATGACAT CACCGACGAT TGGAACCTCA CCGCCAAGTG GGAGCAGGCG
GCCTACGGCC ATGCCTTTTC GAAGCGTATT ATTGGTAATG CTTTGATTGC CTATACCTTA
TTCCAAGGGT TAGGCAATAC ACCGAGCCAG TTTGATGCCG AGGTACGGCC GTTATTAGAT
GGTTTTTTCG CCCGCCCAGC GCCAGAAGCT CAGGACGCCT TGATTGATGA GTTACTCAAA
TTCGAGCAAT GGCATTACAC CTTAGACACC TCACCTAAGC TGGTCGTGTT AGATACCCGC
ACCCGCCGCT GGCGCAGTGA ATCCAATCTC GCTAAACCCT CGGGGTTAAT GGATTGGGAA
GCCTTGATGG ATTTACAACA AGCGCTGCTC GGCCAATCTA AGGTGATTAT CGTCTCCCCT
GCGCCCATGT TTGGGGTCAA GGTGATTGAA GCCGTGCAAC GCATGGCGAC ACTCATGGGC
GGCTCACTGC TGGTCGATGC CGAAAACTGG ATGGCACATC CGGGCGCGGC CAATGCCTTG
CTGAGCATCT TTATGCACCG CAAGACCCCA GAGCAATTTG TGATCCTCTC GGGGGATGTG
CACTACTCCT TCGCCTATGA CATCAGCATT CGCTTTCGCC GTAGCAGCCC GAATATTTAT
CAAATTACCT GTAGCGGAAT TAAAAACCAG TTCCCCGAGA AGCTACTGCC GCTTTTCGAC
AAGCTCAATG GTTGGCTTTA TGGCCACTTC TCGCCGCTCA ACTTGTTCAC TAAACGCAAG
CGAATGTCGC TGCGCGGTAG ACGCCCAAAT GGCGAGCGAA GCAAGCGTTT AGTCAACCGT
AGTGGAATAG GGATTTTAGC GTTAGCGGAG GATGGTGAAC CAACAAAAAT CGCTGTTTTA
CATGGGGATA TGACCGAGAC TCGGTTCGAA CCACCGAGGC AGGAATAG
 
Protein sequence
MLRHCDASHF TLWFVSREPL SELQLTLGEQ SYPLTEEEVH SVQLGQHAFQ YLLRLSRPEL 
LTPQTITQYR VSAKGIDDLF NHVETLGYGD ANSPHLYFSQ TLTQVWHGSC RNPHHHSEDA
LVAADTKLAQ LIDKGANERP ALLMLSGDQV YVDDVAGPML CAIGQVIEKL GLHHEAFHGA
NIAGSEAISY RPEHLYLRHK NLLPRTEYPA KTALWRWYIN HPIFTSSIAE NHLVSLNEMI
ALYLLTWSPE LWELIDLPKE VEGLSAANQL RWQREWQNLL AFKAGLKQVR RLMAHIPVYM
MFDDHDITDD WNLTAKWEQA AYGHAFSKRI IGNALIAYTL FQGLGNTPSQ FDAEVRPLLD
GFFARPAPEA QDALIDELLK FEQWHYTLDT SPKLVVLDTR TRRWRSESNL AKPSGLMDWE
ALMDLQQALL GQSKVIIVSP APMFGVKVIE AVQRMATLMG GSLLVDAENW MAHPGAANAL
LSIFMHRKTP EQFVILSGDV HYSFAYDISI RFRRSSPNIY QITCSGIKNQ FPEKLLPLFD
KLNGWLYGHF SPLNLFTKRK RMSLRGRRPN GERSKRLVNR SGIGILALAE DGEPTKIAVL
HGDMTETRFE PPRQE