Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3529 |
Symbol | |
ID | 4254094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4217131 |
End bp | 4217682 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638120166 |
Product | response regulator receiver protein |
Protein accession | YP_735651 |
Protein GI | 113971858 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGC TATTGATTAT TGAAGACGAT CAGGCACTTG CAGGCGTGCT CGCTCGGCGG TTGACTCGTC ATGGTTTCGA ATGCCGCTTA AGTCACGATG CCAGTAATGC GCTGCTGGTG GCGCGGGAAT TTTGCCCAAG CCATATCCTG TTGGATATGA AACTGGCCGA GGCCAATGGC CTGAGCTTGA TTGTGCCGCT ACGTAATCTG TTGCCTAAAG TCATCATGGT GTTGCTAACG GGGTACGCCA GTATTGCTAC CGCAGTAGAG GCGATTCGCC TCGGCGCCGA CAACTATCTT GCCAAACCCG TCGATACCCA AACCTTGTTG GCGGCCTTCG AGGTGAATAG TCAGGCGAGC GCACTGCCAG AAGATGAAAT CGACGACTCG CCGCTCAGCC CTAAACGGCT GGAATGGGAG CATATTCAGC AAGTACTCAA TGCTAATCAG GGCAATGTGT CGGCTACCGC CCGCCAACTG GGGATGCACC GCCGTACCTT GCAGCGTAAG TTATTAAAGA AACCTGTGAG TGAAACCGGG CCGCTCAAGT AA
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Protein sequence | MKRLLIIEDD QALAGVLARR LTRHGFECRL SHDASNALLV AREFCPSHIL LDMKLAEANG LSLIVPLRNL LPKVIMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL AAFEVNSQAS ALPEDEIDDS PLSPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVSETG PLK
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