Gene Shewmr4_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3529 
Symbol 
ID4254094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4217131 
End bp4217682 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content54% 
IMG OID638120166 
Productresponse regulator receiver protein 
Protein accessionYP_735651 
Protein GI113971858 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGC TATTGATTAT TGAAGACGAT CAGGCACTTG CAGGCGTGCT CGCTCGGCGG 
TTGACTCGTC ATGGTTTCGA ATGCCGCTTA AGTCACGATG CCAGTAATGC GCTGCTGGTG
GCGCGGGAAT TTTGCCCAAG CCATATCCTG TTGGATATGA AACTGGCCGA GGCCAATGGC
CTGAGCTTGA TTGTGCCGCT ACGTAATCTG TTGCCTAAAG TCATCATGGT GTTGCTAACG
GGGTACGCCA GTATTGCTAC CGCAGTAGAG GCGATTCGCC TCGGCGCCGA CAACTATCTT
GCCAAACCCG TCGATACCCA AACCTTGTTG GCGGCCTTCG AGGTGAATAG TCAGGCGAGC
GCACTGCCAG AAGATGAAAT CGACGACTCG CCGCTCAGCC CTAAACGGCT GGAATGGGAG
CATATTCAGC AAGTACTCAA TGCTAATCAG GGCAATGTGT CGGCTACCGC CCGCCAACTG
GGGATGCACC GCCGTACCTT GCAGCGTAAG TTATTAAAGA AACCTGTGAG TGAAACCGGG
CCGCTCAAGT AA
 
Protein sequence
MKRLLIIEDD QALAGVLARR LTRHGFECRL SHDASNALLV AREFCPSHIL LDMKLAEANG 
LSLIVPLRNL LPKVIMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL AAFEVNSQAS
ALPEDEIDDS PLSPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVSETG
PLK