Gene Shewmr4_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3523 
Symbol 
ID4254088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4210847 
End bp4211233 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content49% 
IMG OID638120160 
Producthypothetical protein 
Protein accessionYP_735645 
Protein GI113971852 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACTA GCACACCCAA TGTCACCGAT CTTAAGCTCA AGCGTAAATC GCGCATTTTA 
GAAATCAGCT TCGATAACGG CGAGCAGTAT CAACTCAGCT GTGAGATGTT ACGCGTCTAT
TCCCCCTCCG CCGAAGTGCA TGGTCACGGT AACCCTAAGC TGGTCACCCA CAAGAAAAAT
GTGAATATCA CCAGCATCGA ACCCGTAGGT AACTACGCGG TAAAAATCGT CTTCGACGAT
GGCCACGATA CCGGGCTGTT TTCCTGGCAG GTGCTTTACG ATCTCGCCAC TCACCAAGTG
GAATTATGGG AAAAGTACTT AGCACGCCTG CGAGCTGAGA AGGCTTCCCG CGAACCGCTG
ATTGCGATGA ATATAAAGTA CAACTAA
 
Protein sequence
MTTSTPNVTD LKLKRKSRIL EISFDNGEQY QLSCEMLRVY SPSAEVHGHG NPKLVTHKKN 
VNITSIEPVG NYAVKIVFDD GHDTGLFSWQ VLYDLATHQV ELWEKYLARL RAEKASREPL
IAMNIKYN