| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3521 |
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| Symbol | |
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| ID | 4254086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4208830 |
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| End bp | 4209354 |
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| Gene Length | 525 bp |
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| Protein Length | 174 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120158 |
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| Product | ATP-dependent protease peptidase subunit |
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| Protein accession | YP_735643 |
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| Protein GI | 113971850 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCACTA TCGTATCAGT ACGCCGTAAT AACCAAGTTG TCATCGCCGG CGATGGCCAA
GTCTCCCTAG GCAATACCGT CATGAAAGGT AACGCCAAGA AAGTGCGTCG CTTATATCAC
AACAAAGTGT TGGCAGGTTT TGCTGGCGGC ACCGCCGACG CTTTTACCCT ATTTGAGCGT
TTCGAGTCCA AGCTCGAGAT GCACCAAGGC CATCTATTAC GATCGGCCGT TGAACTGGCC
AAAGATTGGC GAACCGACCG CATGCTGCGC AAACTCGAGG CCATGCTGGT GGTTGCCGAT
GCCGAAGCGT CACTGATCAT CACAGGAAAT GGTGACGTAG TGCAGCCAGA ACATGATTTA
GTCGCCATTG GCTCGGGCGG TAACTATGCC CAAGCGGCGG CGCTAGCCCT GCTACAAAAT
ACCGAATTAT CGGCGCTGGA AATTGCAGAA AAGTCGCTGA CTATTGCAGG CGATATCTGC
GTATTCACCA ATCAATTCAA GACAATTGAA GAACTTAACT ACTAA
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| Protein sequence | MTTIVSVRRN NQVVIAGDGQ VSLGNTVMKG NAKKVRRLYH NKVLAGFAGG TADAFTLFER
FESKLEMHQG HLLRSAVELA KDWRTDRMLR KLEAMLVVAD AEASLIITGN GDVVQPEHDL
VAIGSGGNYA QAAALALLQN TELSALEIAE KSLTIAGDIC VFTNQFKTIE ELNY
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