| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3514 |
|---|
| Symbol | |
|---|
| ID | 4254080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 4201715 |
|---|
| End bp | 4202875 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638120152 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_735637 |
|---|
| Protein GI | 113971844 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.541769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG GCAAAACCCC AACACAGCAT TCGACTCAAC CGCTTAACCG TTTACTCGGT
GAAACCAGCG GCGCCTTCGC CGACCTAGGC ACTTTTTTAC CCTTAGTCTT GGGCTTAATC
GCCCTAAACC AATTTTCGCC CCAAGGGATA TTTTTGGGCT TTGGCCTATT CGCAATCTTA
AGCGCCTTAT TTTATCGCCG CCCTATTCCC GTCCAACCCA TGAAGGTGAT CGCCGCCCTC
GTAATCGCCC AAGGCTTAAC ACCAGGGATG CTCCAAGCCA GTGCCATGCT GATGGGTATC
ATACTGTTAA TCTTGGCCTT TAGCGGCGCC ATTACTTGGC TTGCCAAACA ATTATCCCAA
GCCGTGAGTG TTGGTATCCA ACTAGCGATT GGTCTGCAGT TGATGTGGAT GGGCACTAAG
ATGATGAGCG ACTTTTGGCT GCTCGGACTC GGCGCGTTTG CCTTACTATT TGTGAGTAAA
TTCTTACCCT TACGTTACCT TGCTATGCCA CTCGTTATCG CTGCTGGCAT GTTATGGCAA
GCCAATAGTC AAACCGACAT TGCCACCAGC CTGAACATTC CCGCTTTGAG TACATCCTTA
CATTTAGCTT GGCCTAGCCT TAACGAGTGG AGTTCAGCAG CGATTTTACT GGTGCTGCCA
CAGCTCGCCC TCACCTTAAC CAATGCGGTC ATTGCAACTT CAGCCATGGC GCAGGAAAAA
TTCCCCGAAG ATGCCGCCAA ACTCACGCCT AAAAACTTGG CCATTAGCTC TGGGCTGGCC
AATTTGTTAC TCGCGCCTTT TGGTGCATCG GCCATGTGCC ATGGTGCAGG AGGCCTTGCG
GTGCAATACC ACTTTGGCGC ACGCACTCAC CTCGCGCCAT TAATCTTCGG CAGTACTTGT
GTGGTTATCG CCCTATTCTG GGATGGGCAA ATTGCGTGGT TGCTCGGGCT TATCCCTGTG
GCGATTCTCG GCAGTTTGCT GTCCATCGGC GGTTTGCAAC TGGCGTGGTC AAAACGCCTT
ATCGATGGTA AACCCTTCTG TATCTTTGTG ATCCTCGCGA CCGCAGTCAC TTGCTTGGCT
GTCAACGCCG CAGCGGGCCT CGCTGTCGGA ATTCTTCTAG AGCAAGGTCG CCGCACTTGG
GCCATGCTCG CCATGCGTTA A
|
|---|
| Protein sequence | MTAGKTPTQH STQPLNRLLG ETSGAFADLG TFLPLVLGLI ALNQFSPQGI FLGFGLFAIL
SALFYRRPIP VQPMKVIAAL VIAQGLTPGM LQASAMLMGI ILLILAFSGA ITWLAKQLSQ
AVSVGIQLAI GLQLMWMGTK MMSDFWLLGL GAFALLFVSK FLPLRYLAMP LVIAAGMLWQ
ANSQTDIATS LNIPALSTSL HLAWPSLNEW SSAAILLVLP QLALTLTNAV IATSAMAQEK
FPEDAAKLTP KNLAISSGLA NLLLAPFGAS AMCHGAGGLA VQYHFGARTH LAPLIFGSTC
VVIALFWDGQ IAWLLGLIPV AILGSLLSIG GLQLAWSKRL IDGKPFCIFV ILATAVTCLA
VNAAAGLAVG ILLEQGRRTW AMLAMR
|
|---|
| |