Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3504 |
Symbol | |
ID | 4254070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4190130 |
End bp | 4190882 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120142 |
Product | hypothetical protein |
Protein accession | YP_735627 |
Protein GI | 113971834 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3248] Nucleoside-binding outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000183633 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CATGCCTATG TCTAGCATTA ATGCTTTCAC CTCAAGCATT TGCTGGTGAC TTAGTACAGT GGTGGGATTT CAGTGCAACC GCCCTTTATG GCGAAGACTA CGACTTGGCT CCTTCGGACA AGCAAACGAC AGTCACACTC GAAACCGCTG GTGCATGGAA ATACGGTGAT TGGTTTGCCT TCCAAGATTT TATCTACTTC AAAGGCGACC ACACGGGCAT GGATAGCACC ACCTACGGAG AGATTTCACC TCGCTTTAGC GCGAGCAAAA TCCTCGGCGA AAAAATTGCG TTCGGCCCTA TTACCGATCT TTCATTAGCC CTTACCTACG AAGAAGGTGA AGGCCCTGTG CATAGCTTGC TCTATGGTTT AGGGGTCGAT GTTGCCGTAC CTTACTTTAC CTACCTTAAC TTCAACACTT ATCGTCGCGA TGCAATGAGC TCAGGCAATA TCAGTGATGG CTGGCAGTTC ACCCCAGTCT TCAGAATCGA TATCCCTGTA GGTTCGGCCA ATATCGTGCT CGATGGCTTT ATCGATTGGG TATTTGCAAC GGATAACAGT GGTTATGAAG AGAACTTCCA CTTCAACCCT CAGCTGAAAT ACGATTTAGG TAAGAGCCTA TTTGGTGATC ACAAGGCAAA TAAACTGCTT GTGGGTATCG AGTACGATCT GTGGACCAAC AAATACGGCG TGAAGGGTGT CGACCAAGAC ACTTATTCTG TCATTGCTCA GTACCACTTC TAA
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Protein sequence | MKKTCLCLAL MLSPQAFAGD LVQWWDFSAT ALYGEDYDLA PSDKQTTVTL ETAGAWKYGD WFAFQDFIYF KGDHTGMDST TYGEISPRFS ASKILGEKIA FGPITDLSLA LTYEEGEGPV HSLLYGLGVD VAVPYFTYLN FNTYRRDAMS SGNISDGWQF TPVFRIDIPV GSANIVLDGF IDWVFATDNS GYEENFHFNP QLKYDLGKSL FGDHKANKLL VGIEYDLWTN KYGVKGVDQD TYSVIAQYHF
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