| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3501 |
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| Symbol | |
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| ID | 4254067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4187293 |
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| End bp | 4188225 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120139 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_735624 |
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| Protein GI | 113971831 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.136246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAATCC CATTGAATAC TGATGTCGCG GTAATGGTCA TTTGGGGACT GATTTTCGCC
ATATTTGTGA TTAAGCTGTT CCAATCCATC CGCTTAGTTC CGACTAAATC GGCTTATATT
GTTGAGCGTT TAGGTAAGTA CCACTCGACG TTAGATGCGG GTTTCCACAC CTTAATTCCT
TTTGTCGATA AAGTGGCTTA TATCCATGAC TTAAAAGAGG AAACTATCGA CGTTCCACCA
CAGGAGTGCT TCTCCAGTGA CGAAGTGAAT GTGGAAGTCG ACGGGGTGAT TTATATCTCT
GTTACTGATC CTGTGAAGGC CAGTTATGGC ATCACTGACT ATCGCTATGC GGCAATTCAA
CTGGCGCAGA CCACCACGCG CTCAGTGATC GGCACCTTAG ATCTCGACCG CACCTTCGAA
GAGAGGGATG TGATTTCCGC TAAGGTAGTG GAAGTGCTCG ACCAAGCGGG TGCCATGTGG
GGTATTCGCG TGCACCGCTA TGAGATTAAG AACATCACGC CACCCGAGAC AGTGAAAAAC
GCCATGGAAA TGCAAGTGAA TGCCGAGCGT GAGCGTCGTG CATTACTGGC AAAGAGTGAA
GGTGATAAGC AGAGTAAGAT CAATCGCTCC GAAGGTATTA AAGCGGAAAC CGTAAACCGC
TCTGAAGGTG AAATGCAGCG CCGTATCAAT GAGGCCGAAG GTAAAGCGGA GGAGATTTTA
ACCCTGTCAC GAGCCACTGC GGAATCGATT GAGCGTTTAG CTGCGGTGAT TGCGGCGCCA
GGCGGCCATA ACGCATTGCG TATGCAGCTT GGTGAGCAAT ACTTTAAGCA GCTCGATGGC
TTAAGCCAGA AGTCTAGCCG TGTGGTGCTG CCCGGTAATA TGGTCGATTT CGATTACTGG
ATGAATAGCA TAGGCTTAAA AGAGAAAGCT TAA
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| Protein sequence | MQIPLNTDVA VMVIWGLIFA IFVIKLFQSI RLVPTKSAYI VERLGKYHST LDAGFHTLIP
FVDKVAYIHD LKEETIDVPP QECFSSDEVN VEVDGVIYIS VTDPVKASYG ITDYRYAAIQ
LAQTTTRSVI GTLDLDRTFE ERDVISAKVV EVLDQAGAMW GIRVHRYEIK NITPPETVKN
AMEMQVNAER ERRALLAKSE GDKQSKINRS EGIKAETVNR SEGEMQRRIN EAEGKAEEIL
TLSRATAESI ERLAAVIAAP GGHNALRMQL GEQYFKQLDG LSQKSSRVVL PGNMVDFDYW
MNSIGLKEKA
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