| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3476 |
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| Symbol | |
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| ID | 4254042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4161018 |
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| End bp | 4161593 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638120114 |
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| Product | methylation site containing protein |
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| Protein accession | YP_735599 |
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| Protein GI | 113971806 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000829017 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATTA ATCCTCGGCT GTTTTCGATA AGCACATATC TAAAAGCATC CTCAAAAGCT
AAACAACAGG GGTTTACCTT AATCGAATTA GTGGTTGGCA TGTTAGTCAT TGCCATTGCT
ATCGTGATGC TCAGTAGCAT GTTATTTCCG CAGGCGGATC GCGCTGCCAA GACCTTGCAT
CGAGTCAAGA GTGCCGAACT TGCTCATTCG GTGATGAATG AGATTTGGGG CAAACGTTAC
GACCAAAATA CTAATGCCAA TGGTGGAGTG CCGGCTTGTG GGAGTCCATT AGGGGCACCT
TGCTCAAGTG TGACCAATTT AGGGCCATCG GAGTGGAAAT GGCCGGATGA GGGCGAGGGG
CGTAACGATT TTAACGATGT GGATGACTAT CACGGCTTAA CTCAAAACGC CACTATGCTC
AATTCCAGCA AAACTTATGC GCAGGTGTAT CCAAACTATC AATTAAGTGT CTCTGTCGCC
TATGGTTCTG CACCCAATAC CAAGTTAGTG ACCATTAATG TGACTACTCC AGATAACGAA
GTGATCACTT ACAATCTGGT GAGGAGCAAT TACTAA
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| Protein sequence | MRINPRLFSI STYLKASSKA KQQGFTLIEL VVGMLVIAIA IVMLSSMLFP QADRAAKTLH
RVKSAELAHS VMNEIWGKRY DQNTNANGGV PACGSPLGAP CSSVTNLGPS EWKWPDEGEG
RNDFNDVDDY HGLTQNATML NSSKTYAQVY PNYQLSVSVA YGSAPNTKLV TINVTTPDNE
VITYNLVRSN Y
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