| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3473 |
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| Symbol | |
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| ID | 4254039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4155932 |
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| End bp | 4159717 |
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| Gene Length | 3786 bp |
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| Protein Length | 1261 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638120111 |
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| Product | MSHA biogenesis protein MshQ |
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| Protein accession | YP_735596 |
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| Protein GI | 113971803 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.134713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.928372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACTA AGCTATCAAA AATGATATTT AACAAAATAA TAGCCAAATT CCCATTAATT
CTTTTGCCCA TAATCATGGC ATTCACATCC CATCTGGTGA AAGCTGATTG GACTACAACC
TTTATAGAAG GTGTAAACAA TTACAGTAGA AATGGTTCAA TTACCTTCAA TAGCTCTTAT
TTATATAATG CACCTGATAA TGCGCTTATT TGGTATAGCT ATTTACCAAC ATATAACTAT
ATTCAAGGTG GATACAACCT TGATACTTTA TGCTTAACGA CTAATAACTC CTATCGTTGG
TGCCGAGCAG GAAATTATAT TGCCAGTTTA CCTTCTAACC GTATTGATTT CTCTCAATGT
TCATCTTCAA GCGCTGTAAA TATCGGCCCT CCAACATGGA ATAATACAAA ACTTGATATC
GTTGAAGGTG AATATAATCG TATTTTACTG GAGGGCGGTT CAGATAAGAC AATTCGTTTT
GTCAGTGATG GTGGCATATA TAGAATGAAG TCCCTTACAG CTACTTCGGG TCGAATCGAA
CTGGCTGCTG GGCAATATTG GATTGAAACT TTATCTATTA ATGACGGTGT AACTCTGGTC
TTTCCATCAA CTGGTACTGT GTCATTTTTT ATTAAGAATA ACTATAGACA TTACAACTTA
AATACCATCG GGCAACCAGA AAAATTTCTC ATTTATAGCT ATTCAAATTT CACTCTCAAT
GGAGGGGCAT CTCTTAAATC CTATGTTGTT GCAGAAGGGA ATGCGGTGCT AGAAGGTAGT
TCTTCTTTGG AAGGCGCTAT CACTGCAAGA AATATTAGTT TAGGTGGCAA TAGTAGTATT
AAATTTGACG ATAATGCAGC AAAGATTGAC GTTGTTCCAA ATTGTAATCC TGCGCCCGTT
TTACAGTGCT TTAACGATAA TTTCTCTCAG AGTGCTTTAA GTAACGACTG GGTAGTATCC
CGTAGTAGTG GTTCGTTTAC TCCTTCGGTT GTTAGTGGTC GTATGCGCTT AACCGAGGCA
AAGTCTGATC AATCCACTGC CTCAACCTAT CAAAGATTAT TCCCTGCTGC CAATAACTTA
GTCGAGATCC AGTTTGATCA CTATGCCTAT GGCGGTAGTG GTGCTGATGG TATCGCGCTG
GTGTTATCAG ATGCGGCCAT CACGCCCCAG CCTGGCGCTT TTGGTGGGCC TTTAGGTTAT
GGCTTTAAAC CTGGCATTAA TGGCTTTGCT GGCGGTTGGT TAGGCGTCGG GGTCGATGAG
TTTGGTAACT TCTCCGGTGA AGGGGGAACC ATAAATCGTT CGGGTCAACG TCGTCAGTCG
GTTGCGGTGC GTGGTTCTGG TACTGGCACA TCAGGGTATA ATTATTTACG TGGCACCTGT
AATAACGGTA CCAGCAATAC CAATGGCAAC TGTTTATCAC CCACGGTCGA TGGCAATAAT
GTCTCACCTG CGCACCGCTA TAAAATCACT ATCGACTCGC AGGTATCCGG TCAGTCGATG
GTGAAGATTG AGCGTAATAC GGGGTCGGGA TTTGTCACCT TAATCCCTGC TTTTAATGCC
ATAGATCAAC AAGGGCAAGC GGCGACGCCG AGTGATTTCT TGTTGTCGCT TACAGGCTCA
ACTGGTGGCT CGAATAACAA CCATGAAATT GATAACGTTC AAATTTGTGC CTTAAAGTCT
AATCCCGTTG GGGCGCAAAT CGATCATTTT GAGTTTGACC ATACGGGGCA GGGATTAACT
TGTAACCCCG AAACTGTGAC GATTCGAGCC TGTGCCAACG CCAGTTGTAG TCAGCTTTTT
ACCGATCCTT TAGCGGCGAC CTTGTTACCC GAATCCGCCT CCGAAGGCAT ATGGATTGGT
GGCAATCAGG TGAGCTTTAG TGGTGGTACT GCACAATTAC AATTACGGCG CAATACTGCT
GGCACTGTGA CTTTAGGTGT AAAAGGTTCG AGCCCGACAA CCAAACCTTT AAGTAAAACC
CTTTGCCGTA TTGGGAATGG GGGACTGAGT GAAAATAACT GTTCACTCAA GTTCGCCGAC
AGTGGTTTTA TCTTCGACGT GCCCGATAAA TTGGCCAATA AACCTATTAA TGTGTTGGTC
AAAGCGGTGA ATAAATCTGA TGAGACTCAG CAGTGTGTTC CAAGCTTCCA AAGCCAGACC
AAGACATTGA ATTTCTGGAG CAGTTATCAC ACTCCGAGTG CGCCTATTTC GCCAAAAGCC
GTCACCATCA ACAATACGGC CATTGGCACT TCAAGCGCCT CGCCTACTAC GCTGAATCTG
AAGTTTGATA CTAACGGACA GGCAAGCATT TCAGTGAATT ATCCCGATGC GGGCAAATTA
CAACTCGATG CCCAATATAT CGGCAGTGGC AACGAGCAAG GCCTGGTGAT GACAGGCTCG
GATCAATTTG TCAGTGTGCC TGCGGGGTTG TGCGTCAAAC CCGTGGACGC CAGCGCCAGT
TGTCCAAGTG CGGATATGAG CTGTAATGCC TACCGTAAAG CGGGACAGAA TTTCGGTATG
ACGGTCCAAG CTATGGCTTG GGAAGACGAC CGCGATACGG ACTTTTGCTC GGGCAACTTA
CCTACGCCTA ACTTTAGTGA CCAAGCCATG ACACTAACCA GTAAAGTCTT TGCGCCAAAC
ATTGCCAGCG GCGGCCATGA TGGCGCATTA GGCGTGGCAT CCTATAGTCA TGCTATCCAA
GCCAATAACC TTAATAGCAT CACCAATCAG ACGATTAGCG AAGTGGGGGT ATTCCAAATC
GCGGCGCAGG CGAGTCCTAA CTACCTTGGG GTGGCCAGCA GCTTAAATAT TCCGATTGGC
TATTCAGCCA ATATTGGCCG CTTTGTGCCC GACAGATTTT TAGTGGGCGA TATTTCTGTC
GTACCTGCCT GTGGCAGTTT TAGCTATATG GATCAACTCT TCCCGATGTC GATGAGCCTC
AAAGCCTTAA ATATCGGCGG CGCGGTGACG CAGAACTATT TCCCACCCTT CTCCCTCGCG
ACCGCCAAAT TAGTGGGAGA AAACAACAAC AATGGGGTCG ATTTACAGAG TCGCTTAAGT
TCCTTACACA TTAAGGCTGA TAGTTGGGTT CAAGGTGTGG CGACGGTCGA TGGCACTTAC
CGCGCTAACT TGAGCCGAGT GACCCCGAAT GTGACGACGA ATCTATATCA AGATGGTCCC
TTCGAGCTGC TCGATATTGG TGTGCAGTTG ATGGATAACG ATCCTCGACC TAATGGACTT
TTTAGCTATG TGGCATCGCC TGATATGAAT GCGGCAACCA CAGGTAATTG CACTAACTGT
AATGCCAAGA AAATCACCAC GCAGATCCTG CGCCATGGCC GAGTGGTGAT GGACAATACC
TATGGTCCAG AAACTGAAAT CCTCAGGATG CCGACCCGAG CCGAATATTG GAATGGGACT
AATTGGGTAT TAAATGGCGA TGATAGCTGC ACTATTGCTA CCTACAGCCT TGAGTCGCAG
GTGGATAATG CAGGGCTGGG TTATAACTTT GATCCGGATT TGACCACAGG GCAGAGCATT
AATCGCTCCG GCGCTACATC AGCATTCCAA GCGGGGCAGT TTGATTTGCT GTGGCGAGCG
CTCACCTCAA GTGGCAATTT ATATCGCGGC CAAGTGACCG CGCCTTTAGA TGTTCCGACT
TGGTTAGAAT GGTATTGGAA TTGGAATGGG CTCTCCCCAA CTAGCTTATC CGATCCCCGT
GCGAGTGCAT TTTTTGGTCG TTACCGTGGC CATGACAGAA TCATCTACTG GCGAGAAGTT
AATTAA
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| Protein sequence | MATKLSKMIF NKIIAKFPLI LLPIIMAFTS HLVKADWTTT FIEGVNNYSR NGSITFNSSY
LYNAPDNALI WYSYLPTYNY IQGGYNLDTL CLTTNNSYRW CRAGNYIASL PSNRIDFSQC
SSSSAVNIGP PTWNNTKLDI VEGEYNRILL EGGSDKTIRF VSDGGIYRMK SLTATSGRIE
LAAGQYWIET LSINDGVTLV FPSTGTVSFF IKNNYRHYNL NTIGQPEKFL IYSYSNFTLN
GGASLKSYVV AEGNAVLEGS SSLEGAITAR NISLGGNSSI KFDDNAAKID VVPNCNPAPV
LQCFNDNFSQ SALSNDWVVS RSSGSFTPSV VSGRMRLTEA KSDQSTASTY QRLFPAANNL
VEIQFDHYAY GGSGADGIAL VLSDAAITPQ PGAFGGPLGY GFKPGINGFA GGWLGVGVDE
FGNFSGEGGT INRSGQRRQS VAVRGSGTGT SGYNYLRGTC NNGTSNTNGN CLSPTVDGNN
VSPAHRYKIT IDSQVSGQSM VKIERNTGSG FVTLIPAFNA IDQQGQAATP SDFLLSLTGS
TGGSNNNHEI DNVQICALKS NPVGAQIDHF EFDHTGQGLT CNPETVTIRA CANASCSQLF
TDPLAATLLP ESASEGIWIG GNQVSFSGGT AQLQLRRNTA GTVTLGVKGS SPTTKPLSKT
LCRIGNGGLS ENNCSLKFAD SGFIFDVPDK LANKPINVLV KAVNKSDETQ QCVPSFQSQT
KTLNFWSSYH TPSAPISPKA VTINNTAIGT SSASPTTLNL KFDTNGQASI SVNYPDAGKL
QLDAQYIGSG NEQGLVMTGS DQFVSVPAGL CVKPVDASAS CPSADMSCNA YRKAGQNFGM
TVQAMAWEDD RDTDFCSGNL PTPNFSDQAM TLTSKVFAPN IASGGHDGAL GVASYSHAIQ
ANNLNSITNQ TISEVGVFQI AAQASPNYLG VASSLNIPIG YSANIGRFVP DRFLVGDISV
VPACGSFSYM DQLFPMSMSL KALNIGGAVT QNYFPPFSLA TAKLVGENNN NGVDLQSRLS
SLHIKADSWV QGVATVDGTY RANLSRVTPN VTTNLYQDGP FELLDIGVQL MDNDPRPNGL
FSYVASPDMN AATTGNCTNC NAKKITTQIL RHGRVVMDNT YGPETEILRM PTRAEYWNGT
NWVLNGDDSC TIATYSLESQ VDNAGLGYNF DPDLTTGQSI NRSGATSAFQ AGQFDLLWRA
LTSSGNLYRG QVTAPLDVPT WLEWYWNWNG LSPTSLSDPR ASAFFGRYRG HDRIIYWREV
N
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