Gene Shewmr4_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3472 
Symbol 
ID4254038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4154540 
End bp4155589 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content49% 
IMG OID638120110 
Productrod shape-determining protein MreB 
Protein accessionYP_735595 
Protein GI113971802 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000392935 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.627264 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAGA AGCTGCGTGG CATTTTTTCT AATGATCTAT CGATCGATTT GGGTACAGCT 
AACACCTTAA TTTATGTTCG TGATGAAGGC ATAGTCCTCA ATGAGCCTTC TGTTGTTGCT
ATACGTGGTG AGCGTAGTAG TTCTGGTCAG AAATCTGTGG CCGCTGTCGG TACTGAAGCC
AAACAAATGT TAGGCCGTAC CCCAGGCAAT ATCCAAGCAA TCCGTCCGAT GAAAGACGGT
GTGATTGCCG ACTTTTATGT GACAGAGAAA ATGTTGCAGC ACTTTATTAA ACAAGTGCAT
AACAACAGCT TTTTTCGTCC AAGCCCACGC GTTTTAGTCT GTGTTCCCGT TGGCGCAACC
CAAGTTGAAC GCCGTGCGAT TCGCGAGTCA GCCATGGGCG CAGGTGCCCG TGAAGTTTAT
TTGATTGAAG AGCCTATGGC AGCCGCAATC GGTGCGGGTT TACCCGTATC TGAAGCCACA
GGTTCTATGG TTGTGGATAT CGGTGGTGGT ACCACTGAAG TTGCCATTAT CTCCTTGAAC
GGTGTGGTGT ATTCCTCTTC TGTACGTATC GGCGGTGACA AGTTTGATGA TGCCATCATC
AACTATGTAC GCCGTAACTA CGGCAGCTTG ATTGGTGAAG CAACGGCTGA GCGCATCAAG
CACACTATCG GTACAGCTTA CCCAGGCGAT GAAGTATTAG AGATTGAAGT CCGTGGTCGT
AACTTGGCCG AAGGTGTACC TCGTAGCTTC ACGCTGAACA GCAACGAAAT TTTAGAAGCA
CTGCAAGAGC CATTATCAGG CATTGTGAGT GCAGTCATGG TGGCATTAGA GCAATCGCCG
CCAGAATTAG CGTCTGATAT CTCTGAGCGC GGCATGGTAT TAACCGGTGG TGGTGCCTTA
CTGCGTGATT TAGACCGTTT ATTGATGCAA GAAACTGGAA TTCCAGTCAT GGTGGCGGAC
GATCCTCTGA CCTGCGTAGC GCGTGGTGGT GGTAAAGCCC TTGAAATGAT TGATATGCAC
GGCGGCGATC TGTTCTCCGA AGAAACCTAA
 
Protein sequence
MFKKLRGIFS NDLSIDLGTA NTLIYVRDEG IVLNEPSVVA IRGERSSSGQ KSVAAVGTEA 
KQMLGRTPGN IQAIRPMKDG VIADFYVTEK MLQHFIKQVH NNSFFRPSPR VLVCVPVGAT
QVERRAIRES AMGAGAREVY LIEEPMAAAI GAGLPVSEAT GSMVVDIGGG TTEVAIISLN
GVVYSSSVRI GGDKFDDAII NYVRRNYGSL IGEATAERIK HTIGTAYPGD EVLEIEVRGR
NLAEGVPRSF TLNSNEILEA LQEPLSGIVS AVMVALEQSP PELASDISER GMVLTGGGAL
LRDLDRLLMQ ETGIPVMVAD DPLTCVARGG GKALEMIDMH GGDLFSEET