Gene Shewmr4_3468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3468 
Symbol 
ID4254034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4150739 
End bp4152247 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content52% 
IMG OID638120106 
Productribonuclease G 
Protein accessionYP_735591 
Protein GI113971798 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID[TIGR00757] ribonuclease, Rne/Rng family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.893805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATACCG GTCGCTTAAA TCCGAATAAA GTTCAGCGCA AGATGGGTTC AGAATTACTG 
ATTAACGTAA CCCCATCTGA GGCACGTGTA GCTCTGGTTG AGCATGGCGT GCTGCAAGAA
GTCCATATCG AGAGGCGCAT GAAGCGCGGT CTAGTGGGCA ATATTTACAA GGGCAAAATC
AGCCGTGTGT TGCCCGGCAT GCAAGCCGCC TTTGTGGATA TTGGCTTAGA TAAAGCCGCG
TTTTTACATG CCTCCGATAT TGTGCCGCAC ACCGAATGCG TGGCCGATGT GGAAAAAGGC
CATTTTGTGG TCCGTGATAT CGCCGAGTTG GTTCGCCAAG GGCAAGATAT TATGGTGCAG
GTGGTAAAAG ATCCGCTCGG CACTAAAGGT GCGCGCCTGA CCACAGATAT CACCCTGCCT
TCCCGTTATC TGGTATTTAT GCCCGGCTCA AGCCATGTAG GGGTCTCCCA GCGGATTGAG
CAGGAAGAAG AGCGCAGTCG TCTTAAGAAA ATCACTCTGC CTTTCGTCGA TGAAGACGGA
GGCTTTATTA TCCGCACCGC CGCCGAAGGC GTAGGTGAGG ACGAACTTGC TCAGGATGCG
GCTTTTTTGC GCCGAGTATG GTCTAAGGTC TCCGAACGTC GTCAGCGCCG TGGTGTGGCA
CTCTTGTATC AAGACCTCGC CCTGCCAGTG CGGATTGTGC GCGACTTTGT CGGAACCGAG
CTCGATAGAA TTCAAGTCGA TTCGCGCCGC ACCTTTGCCG AGCTGCAAGC CTTCGCTCAA
GAGTTTATGC CGGAAATCGC CGACAAGATT GAGCACTATT CAGGACCAGC TCCAATTTTC
GATCTCTACG ATGTGGAGAA TGAAATCCAG CGCGCCCTAG GTCGCAAGGT CGAGCTCAAA
TCGGGCGGCT ATCTGATTAT CGATCAGACC GAGGCCATGA CCACGGTCGA TATTAACACT
GGTGCCTTTG TCGGCCACCG TAATCTTGAA GAAACCATCT TCAACACTAA CCTCGAAGCG
ACCCAAGCCA TCGCGCGGCA ACTGCGGCTA CGTAATCTCG GCGGCATCAT CATTATCGAC
TTTATCGATA TGCTGAGTGA CGAGCATAAA ACGCGGGTAC TCAATAGCTT AAATAGCGCG
CTCGCTAAAG ACAGAGTCAA GACGAATGTC AGTGGCTTCT CGGGTCTGGG ATTAGTCGAA
ATGACCCGTA AGCGCACCCG AGAAAGCTTG GAGCATGTGC TGTGCGGTGA ATGCCCTGCC
TGTCAGAGCA CGGGTAGCAT GAAGACGGTT GAAACGGTTT CCTACGAAAT CTTCCGCGAA
ATCATCCGCT TGAATCGAGC CTATGACGCC GATGAGTTTT TGCTTTACTG CTCGCCCGCT
GTGTATAACA GCTTAAGTGG CGATGAAAGT CATCTGGTCG CCGAGCTTGA GGTCTACATA
GGTAAACGCA TTCGCCTGCA AAATGAGCCC ATGTATTCCC AGCATAAATA CGACGTGGTG
ATGATGTAG
 
Protein sequence
MNTGRLNPNK VQRKMGSELL INVTPSEARV ALVEHGVLQE VHIERRMKRG LVGNIYKGKI 
SRVLPGMQAA FVDIGLDKAA FLHASDIVPH TECVADVEKG HFVVRDIAEL VRQGQDIMVQ
VVKDPLGTKG ARLTTDITLP SRYLVFMPGS SHVGVSQRIE QEEERSRLKK ITLPFVDEDG
GFIIRTAAEG VGEDELAQDA AFLRRVWSKV SERRQRRGVA LLYQDLALPV RIVRDFVGTE
LDRIQVDSRR TFAELQAFAQ EFMPEIADKI EHYSGPAPIF DLYDVENEIQ RALGRKVELK
SGGYLIIDQT EAMTTVDINT GAFVGHRNLE ETIFNTNLEA TQAIARQLRL RNLGGIIIID
FIDMLSDEHK TRVLNSLNSA LAKDRVKTNV SGFSGLGLVE MTRKRTRESL EHVLCGECPA
CQSTGSMKTV ETVSYEIFRE IIRLNRAYDA DEFLLYCSPA VYNSLSGDES HLVAELEVYI
GKRIRLQNEP MYSQHKYDVV MM