Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3468 |
Symbol | |
ID | 4254034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4150739 |
End bp | 4152247 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120106 |
Product | ribonuclease G |
Protein accession | YP_735591 |
Protein GI | 113971798 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.893805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATACCG GTCGCTTAAA TCCGAATAAA GTTCAGCGCA AGATGGGTTC AGAATTACTG ATTAACGTAA CCCCATCTGA GGCACGTGTA GCTCTGGTTG AGCATGGCGT GCTGCAAGAA GTCCATATCG AGAGGCGCAT GAAGCGCGGT CTAGTGGGCA ATATTTACAA GGGCAAAATC AGCCGTGTGT TGCCCGGCAT GCAAGCCGCC TTTGTGGATA TTGGCTTAGA TAAAGCCGCG TTTTTACATG CCTCCGATAT TGTGCCGCAC ACCGAATGCG TGGCCGATGT GGAAAAAGGC CATTTTGTGG TCCGTGATAT CGCCGAGTTG GTTCGCCAAG GGCAAGATAT TATGGTGCAG GTGGTAAAAG ATCCGCTCGG CACTAAAGGT GCGCGCCTGA CCACAGATAT CACCCTGCCT TCCCGTTATC TGGTATTTAT GCCCGGCTCA AGCCATGTAG GGGTCTCCCA GCGGATTGAG CAGGAAGAAG AGCGCAGTCG TCTTAAGAAA ATCACTCTGC CTTTCGTCGA TGAAGACGGA GGCTTTATTA TCCGCACCGC CGCCGAAGGC GTAGGTGAGG ACGAACTTGC TCAGGATGCG GCTTTTTTGC GCCGAGTATG GTCTAAGGTC TCCGAACGTC GTCAGCGCCG TGGTGTGGCA CTCTTGTATC AAGACCTCGC CCTGCCAGTG CGGATTGTGC GCGACTTTGT CGGAACCGAG CTCGATAGAA TTCAAGTCGA TTCGCGCCGC ACCTTTGCCG AGCTGCAAGC CTTCGCTCAA GAGTTTATGC CGGAAATCGC CGACAAGATT GAGCACTATT CAGGACCAGC TCCAATTTTC GATCTCTACG ATGTGGAGAA TGAAATCCAG CGCGCCCTAG GTCGCAAGGT CGAGCTCAAA TCGGGCGGCT ATCTGATTAT CGATCAGACC GAGGCCATGA CCACGGTCGA TATTAACACT GGTGCCTTTG TCGGCCACCG TAATCTTGAA GAAACCATCT TCAACACTAA CCTCGAAGCG ACCCAAGCCA TCGCGCGGCA ACTGCGGCTA CGTAATCTCG GCGGCATCAT CATTATCGAC TTTATCGATA TGCTGAGTGA CGAGCATAAA ACGCGGGTAC TCAATAGCTT AAATAGCGCG CTCGCTAAAG ACAGAGTCAA GACGAATGTC AGTGGCTTCT CGGGTCTGGG ATTAGTCGAA ATGACCCGTA AGCGCACCCG AGAAAGCTTG GAGCATGTGC TGTGCGGTGA ATGCCCTGCC TGTCAGAGCA CGGGTAGCAT GAAGACGGTT GAAACGGTTT CCTACGAAAT CTTCCGCGAA ATCATCCGCT TGAATCGAGC CTATGACGCC GATGAGTTTT TGCTTTACTG CTCGCCCGCT GTGTATAACA GCTTAAGTGG CGATGAAAGT CATCTGGTCG CCGAGCTTGA GGTCTACATA GGTAAACGCA TTCGCCTGCA AAATGAGCCC ATGTATTCCC AGCATAAATA CGACGTGGTG ATGATGTAG
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Protein sequence | MNTGRLNPNK VQRKMGSELL INVTPSEARV ALVEHGVLQE VHIERRMKRG LVGNIYKGKI SRVLPGMQAA FVDIGLDKAA FLHASDIVPH TECVADVEKG HFVVRDIAEL VRQGQDIMVQ VVKDPLGTKG ARLTTDITLP SRYLVFMPGS SHVGVSQRIE QEEERSRLKK ITLPFVDEDG GFIIRTAAEG VGEDELAQDA AFLRRVWSKV SERRQRRGVA LLYQDLALPV RIVRDFVGTE LDRIQVDSRR TFAELQAFAQ EFMPEIADKI EHYSGPAPIF DLYDVENEIQ RALGRKVELK SGGYLIIDQT EAMTTVDINT GAFVGHRNLE ETIFNTNLEA TQAIARQLRL RNLGGIIIID FIDMLSDEHK TRVLNSLNSA LAKDRVKTNV SGFSGLGLVE MTRKRTRESL EHVLCGECPA CQSTGSMKTV ETVSYEIFRE IIRLNRAYDA DEFLLYCSPA VYNSLSGDES HLVAELEVYI GKRIRLQNEP MYSQHKYDVV MM
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