| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3464 |
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| Symbol | |
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| ID | 4254030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4142612 |
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| End bp | 4144081 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120102 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_735587 |
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| Protein GI | 113971794 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCAT TTGCAAAGGA AATTAGAGTA ACTACTCTAG AGGTGTTAAT GAAACTATCA
CGTTTGGCAT GGCTGTGTTT ATTGCCTTTG CCCTCGCTAT TGCCGTTAGC GGCCAATGCC
CAGGCCAGTA GCTTTACTGA GGCTTGGCAG CAAGTGCTTA AGGTGAGCGA TAAACTCCAG
GCCCAATCCC AAGAGGTGAA TCGCGCCAAG GGCGAGCAAG AGGCGGGCGA GAGTTTAAAT
CTGCCGTCCC TCAGCCTGAA TGGCAGTTAT ACCCACCTCG AAAAACCAAT CGAATTAGAT
TTAAGGGATC TTAATCCCTT AGCCTCGCTT GACCCTGCGA CCTTACCACC CGCACTCGGC
GGCGCCTTGG CGAGTATTCC AGGTTCGTTA TTTGTCACGC CATTTACCGA GCAAGATATT
TTCCGCGCCA GCTTACAGGC GATGTGGCCG ATTTATACTG GCGGGCAGAT CACCGCGGCG
CAAGGTATTC ATGCCGCCAT GGTGGCCGAG AAGCAACAGG AATTACAGTT AGCGACCCGC
GACTTATTCA CTCAGTTGGT TGACCGTTAT TATGCCGTCG ATGTGACTCA ATCCCTCGTC
AGCACCCAAA CCGAGCTGGT GGCCTCCTTA ACTAAGCATG TTGACCACGC GCTAGCGCTG
GAGCGCGAAG GGCAAATTGC TAAGGTCGAG CGCCTGAATG CTCAAGTTGC CTTAGATAAC
GCTAAGGTCA ATTTAGGCAG CGCCCGCCGT CAACATGAAA TGGCTGTGAT CGCCCTATCG
CGCATGTTGC AGCAGAGCGA TGTCAGCACT AACTCACCTT TATTTGTGTT GCCACAGGCG
CCTTCATTGG GGGATTTGAC CCAAGTGACC CTGAGCCAGC ATCCTGCACT TAAACTGCTC
GAGGCTAAAG AGGCGCAGGC GAATGGCTTG GTTTCCTTAG AGAAAGGCAA ATATCATCCG
ACTGTGTTCC TCTTTGGTAA TTACACCTTA TATGAAGATG ACAGCTTGTT TTCTAAGGTG
GAGCCGGATT GGATGGTGGG TGTCGGCGTA AAAGTGCCCT TGCTGAGTCG CGATGGCCGC
AGCGGTAAAG TGGAAGCGGC TAAGAGTGCC TTGCTGCAAG CCCGTTACAC TAAGGCGCAG
ACCCGCCAAG ACTTAAGTTT GCTGCTAGAC CAAAGTTACC GCCAGTTATT GCAGGCTGAG
GAAGAGGTCA AGGCACTGAA TACCTCACTC GAACTGGCGA GTGAAAACCT GCGTTTAAGG
GAAATTGCCT TTAACCAAGG GCTTTCGACT TCTATCGACA GGGTCGATGC CGAATTAAAA
CTGAGTGCCG TTAAAACCCA GCAGCTTGGT GCCAGTTATC GCTATGTGCA AGCCTATGCC
AGATTAATGG CCATCAGTGG TCAATTAGAT GAATTTATCG GTCGCAGTGC CACAGGCGCT
CAATCGCAGG AGACTATCAA TGCGCGCTAA
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| Protein sequence | MLSFAKEIRV TTLEVLMKLS RLAWLCLLPL PSLLPLAANA QASSFTEAWQ QVLKVSDKLQ
AQSQEVNRAK GEQEAGESLN LPSLSLNGSY THLEKPIELD LRDLNPLASL DPATLPPALG
GALASIPGSL FVTPFTEQDI FRASLQAMWP IYTGGQITAA QGIHAAMVAE KQQELQLATR
DLFTQLVDRY YAVDVTQSLV STQTELVASL TKHVDHALAL EREGQIAKVE RLNAQVALDN
AKVNLGSARR QHEMAVIALS RMLQQSDVST NSPLFVLPQA PSLGDLTQVT LSQHPALKLL
EAKEAQANGL VSLEKGKYHP TVFLFGNYTL YEDDSLFSKV EPDWMVGVGV KVPLLSRDGR
SGKVEAAKSA LLQARYTKAQ TRQDLSLLLD QSYRQLLQAE EEVKALNTSL ELASENLRLR
EIAFNQGLST SIDRVDAELK LSAVKTQQLG ASYRYVQAYA RLMAISGQLD EFIGRSATGA
QSQETINAR
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