| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3463 |
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| Symbol | |
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| ID | 4254029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4141648 |
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| End bp | 4142622 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638120101 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_735586 |
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| Protein GI | 113971793 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCTA ACAGAATCCT TGCCCTAACG GCGTTGGTCG CATTAGGCCT TATCTTAGCC
TATGGGCTCA AACTGGCTTA CAGCCCAGCG CCGAACCTGT TACAGGGGCA AATCGAAGCC
CGTGAATATA ACGTATCATC CAAAGTGCCA GGACGGGTAG AGCAGGTGCT TGTGCGCCGT
GGCGATAGCG TCAGTGAAGG CGATTTGTTA TTTGCCATTC ATAGTCCAGA ACTGGATGCC
AAGTTGATGC AGGCCGAAGG CGGCCGAGAT GCGGCTAAGG CGTTGCAACA GGAGGCGAAT
AACGGTGCCC GCACCCAAGA GGTGATGGCG GCTAAAGAGC AATGGCTCAA GGCGCAAGCG
GCGGCAACGC TGGCAAAAAC CACTTATACC CGAGTGGAAA ATCTCTTTAA CGAAGGGGTT
GCCGCAAGAC AGAAACGCGA TGAAGCCTTT ACTCAGTGGC AAGCGGCCAA GTACACAGAG
CAAGCCGCAT TAGCCATGTA TCAAATGGCC GAAGAGGGTG CGCGGGTCGA AACCAAAGCC
GCAGCGGCGG GTAATGCTCG CATGGCTGAA GGGGCGGTGA AAGAAGTCAG TGCCATTATG
GCTGACAGCC AAATGCGTGC GCCTAAGTCT GGGGAAATCA GCGAAGTATT GTTGCAAGCG
GGAGAGTTAG CACCGAGCGG CTTCCCTGTG GTCAGCCTTA TCGACATGCA GGACGCTTGG
GCAGTATTCC AAGTGCGTGA AGATCAACTC AAACGCTTTA AAAAGGGCGA TAAACTGCCA
TTAACCATTC CTGCGCTGGA TAAAACCGTG GAGTTCACCG TCGCCCATAT TAGTGTGATG
GGCGACTTTG CGACTTGGCG TTCAACCGAA AGTGGCCACG ATTTCGATAT GCGCACCTTC
GAGGTGGAGC TGCGCCCAAC TGCGCCGATC CCCGATCTGC GTGTCGGTAT GTCTGTGCTG
CTCAGTGCTG AGTAA
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| Protein sequence | MRANRILALT ALVALGLILA YGLKLAYSPA PNLLQGQIEA REYNVSSKVP GRVEQVLVRR
GDSVSEGDLL FAIHSPELDA KLMQAEGGRD AAKALQQEAN NGARTQEVMA AKEQWLKAQA
AATLAKTTYT RVENLFNEGV AARQKRDEAF TQWQAAKYTE QAALAMYQMA EEGARVETKA
AAAGNARMAE GAVKEVSAIM ADSQMRAPKS GEISEVLLQA GELAPSGFPV VSLIDMQDAW
AVFQVREDQL KRFKKGDKLP LTIPALDKTV EFTVAHISVM GDFATWRSTE SGHDFDMRTF
EVELRPTAPI PDLRVGMSVL LSAE
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