Gene Shewmr4_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3456 
Symbol 
ID4254022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4132998 
End bp4133531 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content47% 
IMG OID638120094 
Producthypothetical protein 
Protein accessionYP_735579 
Protein GI113971786 
COG category[S] Function unknown 
COG ID[COG3028] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTG TTGGTGATTC AGAGCATTTT AAACAACCCT ATGACAGTGA CGAAGAGTAT 
GTCAGCAAAA CCGAGGACAA GCGTGACTGC GAAGCTGCTC AAAAAGTCGG TATGGAATTG
GTGTCGCTCA GCAAAACCCA GCTAGATAAA ATCGAGCTGG ACGAGCACTT ATATGACAGC
ATCCAGCAAG CCCATAAGAT TAAGCCGAAG ACAGAAGCCT ATCGTCGCCA TATGCAATAT
ATCGGTAAGT TGATGCGTCA CGTCGATGTG GAGCCGATTA AAGCGGCGCT CGCTGTCGTG
CTGAACAAAA ACAGCAACGA AACCGCTAAG CTGCAAATAT TCGAGAAAAT GCGCGAGCGC
TTACTGAGCC AAGGCGACAG CGAAATTCAA ACCTTAGTGG AACATTACCC ACAGTTGGAC
AGACAGAAGC TGCGTACTTT AGTGCGTCAA GCCACGAAAG AGCTGGCGAA AGGCCCTGAG
TCCAAATCCT CAAAAGAGCT GTTTAAATAC CTACGCAGCG AAATTCAAGA CTAA
 
Protein sequence
MKIVGDSEHF KQPYDSDEEY VSKTEDKRDC EAAQKVGMEL VSLSKTQLDK IELDEHLYDS 
IQQAHKIKPK TEAYRRHMQY IGKLMRHVDV EPIKAALAVV LNKNSNETAK LQIFEKMRER
LLSQGDSEIQ TLVEHYPQLD RQKLRTLVRQ ATKELAKGPE SKSSKELFKY LRSEIQD