Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3455 |
Symbol | |
ID | 4254021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4131479 |
End bp | 4132822 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120093 |
Product | microcin-processing peptidase 1 |
Protein accession | YP_735578 |
Protein GI | 113971785 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTTTGA ACAGAATCGA TAGTGAATTG GCCGCGCTGA AAGATGCGGT TGCCGTGGCC CTCGAATATG CCAATAAATT AGGGACAAAT GCCGCCGAAG TGGCGATCAG TAAACAACAG GGATTATCGG TTTCAACCCG CTTAAAAGAA GTGGAAACAG TTGAATTTAA TAAAGATGGC GCCCTAGGGA TTACGGTTTA TCGCGATGGT TGCAAGGGCA GTTCATCGAC TTCCGATCTC AGTCCCGAAG CCATTGCCCT AGCGGTGAAA GCGGCGGACG ATATCGCCCG TTACACCTCG GCCGACCCCT TTAGCGGTTT AGCCGACAAA GCCTTAATGG CGACCGAGAT CCGCGATCTT AAGCTCTATT ATCCTGAAGA TATTTCTCCC GACGAATTAG CCCAATTGGC GATTCGCGCC GAAACTGCGG CGCTCGATGC CGATCCGCGC ATCAATAACT CCGATGGTGC CAGCGCAAAC GCCCACACTT CGGTCAAGGT TTACGGTAAT AGCCACGGCT TCTTAAATGG TTATTGCAGC TCGCGTTATA GCTTAAGTTG CAGCGTGATC GGTGAAGACT CCGACGGCAG CATGCAGCGG GATTACGATT ACACTATCGC CCGTAAATTC AGTGAGATGC TATCTCCAGA ATCCGTTGGC TTGAAAACCG CACAAAAGAC AGTGAGCCGT TTAGGCGCGC GTAAGATTGC GACTTCGCGT TTACCCATTC TGCTTTCGCC TGAAATCGCC ACAGGGCTCA TCGGTCATTT AGTCGGCGCG ATCAGCGGTG GTAGCTTGTA CCGTAAATCC AGCTTCCTGT TGGATGCGAT TCACACCCAA ATCTTCCCCG ATTGGTTCAA CATTGAAGAA CAGCCGCATC TGTTGGGCGC GCTCGCCAGT GCCAACTACG ATAGCGAAGG TGTAGCGACG CAAGATAGAC GCATCATCGA CCGGGGTATG TTAGAAAGCT ATCTGCTGAC CAGCTATTCG GCGCGCAAAC TAGGCTTAAC CAATACAGGC CATGCGGGCG GCATCTACAA CTGGACGCTG GCGCACACCG GCCAAAGCTT CGATGAGCTA GTCAAAGGCA TGGGCACTGG CCTGATTGTC ACTGAAGTGA TGGGCCAAGG CGTGAATATG GTGACGGGGG ATTATTCCCG CGGCGCCGCT GGTTTTTATG TGGAAAATGG CGAAGTGCAG TTCCCCGTCG AAGAGATCAC TATCGCGGGC AACTTGAAGG ATATGTTCCG TGGTATTCAG GCGGTCAGTA AGGACTTCGA TTTACGTTCG TCTATCCGCA CCGGCGGGAT CTTATTATCC GAGATGAAGG TCGCAGGTAA CTGA
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Protein sequence | MSLNRIDSEL AALKDAVAVA LEYANKLGTN AAEVAISKQQ GLSVSTRLKE VETVEFNKDG ALGITVYRDG CKGSSSTSDL SPEAIALAVK AADDIARYTS ADPFSGLADK ALMATEIRDL KLYYPEDISP DELAQLAIRA ETAALDADPR INNSDGASAN AHTSVKVYGN SHGFLNGYCS SRYSLSCSVI GEDSDGSMQR DYDYTIARKF SEMLSPESVG LKTAQKTVSR LGARKIATSR LPILLSPEIA TGLIGHLVGA ISGGSLYRKS SFLLDAIHTQ IFPDWFNIEE QPHLLGALAS ANYDSEGVAT QDRRIIDRGM LESYLLTSYS ARKLGLTNTG HAGGIYNWTL AHTGQSFDEL VKGMGTGLIV TEVMGQGVNM VTGDYSRGAA GFYVENGEVQ FPVEEITIAG NLKDMFRGIQ AVSKDFDLRS SIRTGGILLS EMKVAGN
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