Gene Shewmr4_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3455 
Symbol 
ID4254021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4131479 
End bp4132822 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content52% 
IMG OID638120093 
Productmicrocin-processing peptidase 1 
Protein accessionYP_735578 
Protein GI113971785 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTTGA ACAGAATCGA TAGTGAATTG GCCGCGCTGA AAGATGCGGT TGCCGTGGCC 
CTCGAATATG CCAATAAATT AGGGACAAAT GCCGCCGAAG TGGCGATCAG TAAACAACAG
GGATTATCGG TTTCAACCCG CTTAAAAGAA GTGGAAACAG TTGAATTTAA TAAAGATGGC
GCCCTAGGGA TTACGGTTTA TCGCGATGGT TGCAAGGGCA GTTCATCGAC TTCCGATCTC
AGTCCCGAAG CCATTGCCCT AGCGGTGAAA GCGGCGGACG ATATCGCCCG TTACACCTCG
GCCGACCCCT TTAGCGGTTT AGCCGACAAA GCCTTAATGG CGACCGAGAT CCGCGATCTT
AAGCTCTATT ATCCTGAAGA TATTTCTCCC GACGAATTAG CCCAATTGGC GATTCGCGCC
GAAACTGCGG CGCTCGATGC CGATCCGCGC ATCAATAACT CCGATGGTGC CAGCGCAAAC
GCCCACACTT CGGTCAAGGT TTACGGTAAT AGCCACGGCT TCTTAAATGG TTATTGCAGC
TCGCGTTATA GCTTAAGTTG CAGCGTGATC GGTGAAGACT CCGACGGCAG CATGCAGCGG
GATTACGATT ACACTATCGC CCGTAAATTC AGTGAGATGC TATCTCCAGA ATCCGTTGGC
TTGAAAACCG CACAAAAGAC AGTGAGCCGT TTAGGCGCGC GTAAGATTGC GACTTCGCGT
TTACCCATTC TGCTTTCGCC TGAAATCGCC ACAGGGCTCA TCGGTCATTT AGTCGGCGCG
ATCAGCGGTG GTAGCTTGTA CCGTAAATCC AGCTTCCTGT TGGATGCGAT TCACACCCAA
ATCTTCCCCG ATTGGTTCAA CATTGAAGAA CAGCCGCATC TGTTGGGCGC GCTCGCCAGT
GCCAACTACG ATAGCGAAGG TGTAGCGACG CAAGATAGAC GCATCATCGA CCGGGGTATG
TTAGAAAGCT ATCTGCTGAC CAGCTATTCG GCGCGCAAAC TAGGCTTAAC CAATACAGGC
CATGCGGGCG GCATCTACAA CTGGACGCTG GCGCACACCG GCCAAAGCTT CGATGAGCTA
GTCAAAGGCA TGGGCACTGG CCTGATTGTC ACTGAAGTGA TGGGCCAAGG CGTGAATATG
GTGACGGGGG ATTATTCCCG CGGCGCCGCT GGTTTTTATG TGGAAAATGG CGAAGTGCAG
TTCCCCGTCG AAGAGATCAC TATCGCGGGC AACTTGAAGG ATATGTTCCG TGGTATTCAG
GCGGTCAGTA AGGACTTCGA TTTACGTTCG TCTATCCGCA CCGGCGGGAT CTTATTATCC
GAGATGAAGG TCGCAGGTAA CTGA
 
Protein sequence
MSLNRIDSEL AALKDAVAVA LEYANKLGTN AAEVAISKQQ GLSVSTRLKE VETVEFNKDG 
ALGITVYRDG CKGSSSTSDL SPEAIALAVK AADDIARYTS ADPFSGLADK ALMATEIRDL
KLYYPEDISP DELAQLAIRA ETAALDADPR INNSDGASAN AHTSVKVYGN SHGFLNGYCS
SRYSLSCSVI GEDSDGSMQR DYDYTIARKF SEMLSPESVG LKTAQKTVSR LGARKIATSR
LPILLSPEIA TGLIGHLVGA ISGGSLYRKS SFLLDAIHTQ IFPDWFNIEE QPHLLGALAS
ANYDSEGVAT QDRRIIDRGM LESYLLTSYS ARKLGLTNTG HAGGIYNWTL AHTGQSFDEL
VKGMGTGLIV TEVMGQGVNM VTGDYSRGAA GFYVENGEVQ FPVEEITIAG NLKDMFRGIQ
AVSKDFDLRS SIRTGGILLS EMKVAGN