Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3450 |
Symbol | |
ID | 4254016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4124834 |
End bp | 4125544 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120088 |
Product | hypothetical protein |
Protein accession | YP_735573 |
Protein GI | 113971780 |
COG category | [S] Function unknown |
COG ID | [COG2968] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATT CTCTTTTAGC TGTATTAGTG GCTGGTGGTC TTTTTTCAGG TGTGTTTACC GCAAAGGCGA TGGCCGCCGA CGTAGATTTT CCCCATATTG AAACCATGGG GGTGAGCCAA ATTCAGGTTG AGCCGGATAT GGCAGAGCTT AATGTTGAAG TAGCCGTTAC TGAGAAAGAG GCCAAGGCCG CTAAGGATAA TTCGGATGCC GCAGTGGCGA AATTTATCGC CCGTTTAACC GCCGCGGGCA TTACCAAGGA GCAAATCCAA AGCGCTAACT TAAATCTGCA GCCGCAATAT GTGTATGCCC AGGATAAGGC GCCAGAGCTG AGTGGTTACA CCGCGAGTCG CCAAATCACA GTCACTATTA GTGATTTAGC CCGATTAAAT ACCATTTTGG ACTCCGCCTT AGAGGAGGGG ATCAACAGGG TTAATAATAT CGCCCTTAAG TCGAGCAAAG AGGCCGAGTA TGTGGCCAAG GCGCGCCAAG CGGCCATTGT TGATGCTAAA CAAAAAGCCG AAAGCTTAGC CAAGGGATTT GGGGAGAACC TAGGTAAGGT GTGGCAAATT CGTTATTACG ATCAACGCCC TGTACAGCCC GTAATGTTAC GTATGAATGC CAAGGCCGAT GCCATGGGCG CCGCCGAAAG CTATCAATAT GGCCAAGTGA CTATCGAAGA CAGAGTCGAA GTGGTTTATA AACTCAAATA A
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Protein sequence | MKHSLLAVLV AGGLFSGVFT AKAMAADVDF PHIETMGVSQ IQVEPDMAEL NVEVAVTEKE AKAAKDNSDA AVAKFIARLT AAGITKEQIQ SANLNLQPQY VYAQDKAPEL SGYTASRQIT VTISDLARLN TILDSALEEG INRVNNIALK SSKEAEYVAK ARQAAIVDAK QKAESLAKGF GENLGKVWQI RYYDQRPVQP VMLRMNAKAD AMGAAESYQY GQVTIEDRVE VVYKLK
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