Gene Shewmr4_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3450 
Symbol 
ID4254016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4124834 
End bp4125544 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content49% 
IMG OID638120088 
Producthypothetical protein 
Protein accessionYP_735573 
Protein GI113971780 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCATT CTCTTTTAGC TGTATTAGTG GCTGGTGGTC TTTTTTCAGG TGTGTTTACC 
GCAAAGGCGA TGGCCGCCGA CGTAGATTTT CCCCATATTG AAACCATGGG GGTGAGCCAA
ATTCAGGTTG AGCCGGATAT GGCAGAGCTT AATGTTGAAG TAGCCGTTAC TGAGAAAGAG
GCCAAGGCCG CTAAGGATAA TTCGGATGCC GCAGTGGCGA AATTTATCGC CCGTTTAACC
GCCGCGGGCA TTACCAAGGA GCAAATCCAA AGCGCTAACT TAAATCTGCA GCCGCAATAT
GTGTATGCCC AGGATAAGGC GCCAGAGCTG AGTGGTTACA CCGCGAGTCG CCAAATCACA
GTCACTATTA GTGATTTAGC CCGATTAAAT ACCATTTTGG ACTCCGCCTT AGAGGAGGGG
ATCAACAGGG TTAATAATAT CGCCCTTAAG TCGAGCAAAG AGGCCGAGTA TGTGGCCAAG
GCGCGCCAAG CGGCCATTGT TGATGCTAAA CAAAAAGCCG AAAGCTTAGC CAAGGGATTT
GGGGAGAACC TAGGTAAGGT GTGGCAAATT CGTTATTACG ATCAACGCCC TGTACAGCCC
GTAATGTTAC GTATGAATGC CAAGGCCGAT GCCATGGGCG CCGCCGAAAG CTATCAATAT
GGCCAAGTGA CTATCGAAGA CAGAGTCGAA GTGGTTTATA AACTCAAATA A
 
Protein sequence
MKHSLLAVLV AGGLFSGVFT AKAMAADVDF PHIETMGVSQ IQVEPDMAEL NVEVAVTEKE 
AKAAKDNSDA AVAKFIARLT AAGITKEQIQ SANLNLQPQY VYAQDKAPEL SGYTASRQIT
VTISDLARLN TILDSALEEG INRVNNIALK SSKEAEYVAK ARQAAIVDAK QKAESLAKGF
GENLGKVWQI RYYDQRPVQP VMLRMNAKAD AMGAAESYQY GQVTIEDRVE VVYKLK