Gene Shewmr4_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3428 
Symbol 
ID4253994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4099277 
End bp4100119 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content52% 
IMG OID638120066 
Producthydratase/decarboxylase family protein 
Protein accessionYP_735551 
Protein GI113971758 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3971] 2-keto-4-pentenoate hydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGA CAGACGCTAA AACACAGCTT GAGTCCATTA ACGTAGCAGC ACAAGAGCTC 
GCCCAGCGAC GCGCCAAAGG TGAAGCGGGC GCCCTGTTAG AAGAAGCGCT AAGACCGAAA
GATTTCCCCC AGGCCTTTGC CATCCAGCAG ACCATTGCGC AGCAGTTTAG CAACCAAGGC
AACCCGATTG CGGGTTGGAA GTGCCTACTG CCAACCGCAG AAAAAACCGT GGTAGCACCT
ATCTATCAAC ATGATGTGTA TGTCGAAACC GCCGAGTGTC CACTTTATCC TTCGAGCAAA
GGGCTTGCCC GCGTCGAACC CGAGCTCGCC TTTGAAATTG GCAGCGATTT ACCACCACGA
GCAACACCTT ATTCGGAAGC CGAAATCGAT GCTGCTCTCG GTAGAACGCG CCTCGCTTTA
GAACTTATCC AAAGTCGTTA TCAAAACCCA AGCGAAGCCA ACCACTTCGA TGCTCTCGCC
GATGGTTTAG TCAATCAAGG CCTATGGTTA GGGCCAGAAA TCTCAACCTC GGCTGAAACA
GGCCATTTCG CCCTGAGTGT TGAAGTTGCC GCTGGCGGAC GGCAAGCAAG TGAGACGCTG
CAAAAAGCTG CGGTTCATCC CAACGGTTTC CCTAAAGCAG GGCTTTATTG GTTGGTCAAC
TTCTTATCAG CCCAAGGGAT TGGCTTAACC CGAGGACAGT ATGTGATCAC AGGCTCCTAT
GCTGGGGTAT TAGATCTGCC GCTCAATCAG CACTGCCAAT TCCACTACGG CGAGTTAGGT
CAATTTGGTT TGCAGTTCGT GGCTAAATAT GTCCCCCCTA AAGAGCGCCA AGCAAATCGG
TAA
 
Protein sequence
MSQTDAKTQL ESINVAAQEL AQRRAKGEAG ALLEEALRPK DFPQAFAIQQ TIAQQFSNQG 
NPIAGWKCLL PTAEKTVVAP IYQHDVYVET AECPLYPSSK GLARVEPELA FEIGSDLPPR
ATPYSEAEID AALGRTRLAL ELIQSRYQNP SEANHFDALA DGLVNQGLWL GPEISTSAET
GHFALSVEVA AGGRQASETL QKAAVHPNGF PKAGLYWLVN FLSAQGIGLT RGQYVITGSY
AGVLDLPLNQ HCQFHYGELG QFGLQFVAKY VPPKERQANR