Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3428 |
Symbol | |
ID | 4253994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4099277 |
End bp | 4100119 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120066 |
Product | hydratase/decarboxylase family protein |
Protein accession | YP_735551 |
Protein GI | 113971758 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3971] 2-keto-4-pentenoate hydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGA CAGACGCTAA AACACAGCTT GAGTCCATTA ACGTAGCAGC ACAAGAGCTC GCCCAGCGAC GCGCCAAAGG TGAAGCGGGC GCCCTGTTAG AAGAAGCGCT AAGACCGAAA GATTTCCCCC AGGCCTTTGC CATCCAGCAG ACCATTGCGC AGCAGTTTAG CAACCAAGGC AACCCGATTG CGGGTTGGAA GTGCCTACTG CCAACCGCAG AAAAAACCGT GGTAGCACCT ATCTATCAAC ATGATGTGTA TGTCGAAACC GCCGAGTGTC CACTTTATCC TTCGAGCAAA GGGCTTGCCC GCGTCGAACC CGAGCTCGCC TTTGAAATTG GCAGCGATTT ACCACCACGA GCAACACCTT ATTCGGAAGC CGAAATCGAT GCTGCTCTCG GTAGAACGCG CCTCGCTTTA GAACTTATCC AAAGTCGTTA TCAAAACCCA AGCGAAGCCA ACCACTTCGA TGCTCTCGCC GATGGTTTAG TCAATCAAGG CCTATGGTTA GGGCCAGAAA TCTCAACCTC GGCTGAAACA GGCCATTTCG CCCTGAGTGT TGAAGTTGCC GCTGGCGGAC GGCAAGCAAG TGAGACGCTG CAAAAAGCTG CGGTTCATCC CAACGGTTTC CCTAAAGCAG GGCTTTATTG GTTGGTCAAC TTCTTATCAG CCCAAGGGAT TGGCTTAACC CGAGGACAGT ATGTGATCAC AGGCTCCTAT GCTGGGGTAT TAGATCTGCC GCTCAATCAG CACTGCCAAT TCCACTACGG CGAGTTAGGT CAATTTGGTT TGCAGTTCGT GGCTAAATAT GTCCCCCCTA AAGAGCGCCA AGCAAATCGG TAA
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Protein sequence | MSQTDAKTQL ESINVAAQEL AQRRAKGEAG ALLEEALRPK DFPQAFAIQQ TIAQQFSNQG NPIAGWKCLL PTAEKTVVAP IYQHDVYVET AECPLYPSSK GLARVEPELA FEIGSDLPPR ATPYSEAEID AALGRTRLAL ELIQSRYQNP SEANHFDALA DGLVNQGLWL GPEISTSAET GHFALSVEVA AGGRQASETL QKAAVHPNGF PKAGLYWLVN FLSAQGIGLT RGQYVITGSY AGVLDLPLNQ HCQFHYGELG QFGLQFVAKY VPPKERQANR
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