| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3420 |
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| Symbol | |
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| ID | 4253986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4088261 |
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| End bp | 4089628 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120058 |
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| Product | major facilitator transporter |
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| Protein accession | YP_735543 |
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| Protein GI | 113971750 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000601324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTAACA ACGGACTTTC AGGAACCGAG AAAAAAGTCG CGTTTTCTTT AGCCAGCGTA
TTTGGTTTAC GTATGATGGG CTTGTTTATG ATCATGCCCG TCTTTGCACT CTATGGTCAG
CATTTAGAAG GTTTTTCTCC CCTTTGGGTG GGGATTGCCA TTGGTGCCTA TGGTTTGACT
CAGGCCGTTT TGCAGATCCC TATGGGGATT TTATCAGACA AGTATGGTCG TAAACCTGTC
ATTCTCGCTG GCCTAGTATT GTTCGCCATC GGCAGCTTAA TTGCCGCCAA TGCCGATACG
ATTTACGGGG TGGTATTTGG CCGTGCCGTG CAAGGTATGG GGGCGATTGC CGCCGCCGTG
TTGGCCTTAG CGGCGGACTT AACCCGAGAT GAGCAGCGCA CTAAGGTGAT GGCCATTATC
GGCATGTGTA TCGGCGGCTC CTTTGCCCTG TCGTTACTCG TGGGCCCAAT TGTGGCGCAG
CATTTAGGCT TATCGGGTTT ATTCCTGCTA ACCGCTGGCC TTGCGGTACT TGGCATGTTG
ATTGTGCAGT TATTAGTGCC GAATCCGATT TCCCATGCAC CTAAGGGCGA TACCTTAGCC
GCGCCCGCCA AGCTCAAGCG TATGTTGACC GATCCGCAGC TGTTTAGGCT CGATGCGGGT
ATTTTTATTC TGCACTTAGT GTTAACCGCG GTGTTTGTCG CCTTGCCACT CGATTTAGTC
GATGCGGGTC TGGTGAAAGA AAAACATTGG ATGCTGTATT TCCCCGCGTT TGTGGGCGCA
TTCTTCTTGA TGGTGCCGTT AATCATCATT GGGGTGAAGC GTAAGAATAC TAAGGCGATG
TTCCAAATTG CTTTAGTGAT CATGATGTTT GCCCTTGCGG CCATGGCGAT GTTTTCGAAC
AACCTCTGGG TATTGAGCGT GGCAGTGCTG CTGTTTTTTA CCGGCTTTAA CTACCTTGAG
GCGTCGCTGC CGAGTTTGAT TGCGAAATTC TGCCCCGTTG GTGAAAAAGG CTCGGCCATG
GGGGTCTATT CAACTAGCCA ATTCTTAGGC GCATTCTGTG GAGGTATGCT CGGCGGCGGT
GCGTTCCAAT TAGTCGGCGC CGTGGGCGTG TTTATCGTCG CGCTGGTATT GATGGGCGTT
TGGTTATTAT TGACCCTAGG GATGAAAAAT CCTGTGCTGC TTAAGAGTTA CACCTTAGAG
GCTGCCGTAA AAGATAAGGC CCAAGCGCGG GATATGGCGT CGCAGCTGTC ACAATTGATG
GGTGTGGTCG AAGCGATTGT GGTGCTAGAT GAGAAAGTTG CTTATCTCAA AGTTGACGAG
CATTTCGATT TAAGAGAAGC CCGAGCTGTG TTAGGCTCTG CTCAATAA
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| Protein sequence | MGNNGLSGTE KKVAFSLASV FGLRMMGLFM IMPVFALYGQ HLEGFSPLWV GIAIGAYGLT
QAVLQIPMGI LSDKYGRKPV ILAGLVLFAI GSLIAANADT IYGVVFGRAV QGMGAIAAAV
LALAADLTRD EQRTKVMAII GMCIGGSFAL SLLVGPIVAQ HLGLSGLFLL TAGLAVLGML
IVQLLVPNPI SHAPKGDTLA APAKLKRMLT DPQLFRLDAG IFILHLVLTA VFVALPLDLV
DAGLVKEKHW MLYFPAFVGA FFLMVPLIII GVKRKNTKAM FQIALVIMMF ALAAMAMFSN
NLWVLSVAVL LFFTGFNYLE ASLPSLIAKF CPVGEKGSAM GVYSTSQFLG AFCGGMLGGG
AFQLVGAVGV FIVALVLMGV WLLLTLGMKN PVLLKSYTLE AAVKDKAQAR DMASQLSQLM
GVVEAIVVLD EKVAYLKVDE HFDLREARAV LGSAQ
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