Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3415 |
Symbol | |
ID | 4253981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4079134 |
End bp | 4080507 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638120053 |
Product | hypothetical protein |
Protein accession | YP_735538 |
Protein GI | 113971745 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.636274 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAACA ATAAACTAAA AGGATTCGCG GTTTTGACCT TCGCCTGTTT GGGCGTGACC GCTTGTGGTG GCTCCGATAA CAACAAGGAT GAGGACACCT CGAAGACCGA TACTTATGTG CAATTCTACA ATGCTTCAGT GGGGAGTACG GCCACTGCAC TTAAGATTGG CGATAAAACC TATGAGAGCG TGAGCTACGC CGATGCGATG CCAAGGTTTA CTTCAACACC GGGCGTGAGT GCCGTCGAGG TAATGGGTAA AGATGCGTCT AACAAGGATA TTTCGATCTA CAAAGAGGAT ATCGATCTAA AAACCGCAAC TGATCACTTC TTTGTGTTGC ATGGGGATTT TGCCTCGCCA TCGCTGCTAA ATATCAATTA CTCCCGCACT GAGTTAGATA AGCAAAATGC CGAAGCGGAT AAGAGCAAAA TGCAATTATT GATCGCCCAT ACGGCGATGG ATGCGCCTGC CTACGATGCC TATATTGCCA AAGCCGATCA AAGCTTTGCC GATGCGGTGA TGCTGGGCAG TGTCTCCTAC GGTGACGTTT CAACACCGCA GATTTTGGAC ACTGGGGATT ACAAGGTTTA CCTCGCACCT GCGGGAACCA CCAACGTGAG CTACACCACG GCAAGCATTA ACTTTAAGTC TAAGGTGCCC TATAAGTTGA TTTTAAGGGA AAGCTTTGGC GCCTCGGATG CCAAAATCAG CTTAGACAGT GTCGATTCAA CCACTAATGT GCGTAATCAT GTCGCCCTCG AAAGTAGTGT AGGCTTTAGA GTATTCAACG GCTTGGCCGC ACATAATGTC GATGTCAAAG TGGTGAGCAA TAAACAAGAA GCCCTATTTA GCAATGTGGT TCCCTTTGGC GTGACTGCTT ATCAAGGCGC GGAGTTTAAT GACTTTGGCG TGAGTGTGTT TGACCACACT AGCCAGGCTA AATTGCTCGA TAATGTGTTG ATCACCCTTA ATCAGGACGA TATCAAAACC ATCTTCATCT ACGAGCAAAC CACCGAAGAG GGTAGCCAAG TCAAGGCGAT GGAGATGAAG CAAACGCAAA CGCCAAGCCC CTACAGCTTT AAGTTCGATA TTCTTAGTTT TGCCGACAAG AGTAACCTGA CGCTGTATTT CTTAAAGGCA AACGACACCA TTGAAACTGC GACCTATAAG ATCAGTGCCA TTAATCCAAC GGCGCCGCAA TCCTTAGTAG TGCCAAAAGG TGAGTATTCC ATCAAGGTCA TTGCGGTGGA AAATGGCACT AAGACAGTAG TTTATGCATC AGAGATGATG GATTTTAATA ACGAAGATAA TGTCACTATG GTGCTGAATA AGGACGCTTC AACCAGCTTT GGCTATAACC TCGTTAAGCT TTAA
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Protein sequence | MLNNKLKGFA VLTFACLGVT ACGGSDNNKD EDTSKTDTYV QFYNASVGST ATALKIGDKT YESVSYADAM PRFTSTPGVS AVEVMGKDAS NKDISIYKED IDLKTATDHF FVLHGDFASP SLLNINYSRT ELDKQNAEAD KSKMQLLIAH TAMDAPAYDA YIAKADQSFA DAVMLGSVSY GDVSTPQILD TGDYKVYLAP AGTTNVSYTT ASINFKSKVP YKLILRESFG ASDAKISLDS VDSTTNVRNH VALESSVGFR VFNGLAAHNV DVKVVSNKQE ALFSNVVPFG VTAYQGAEFN DFGVSVFDHT SQAKLLDNVL ITLNQDDIKT IFIYEQTTEE GSQVKAMEMK QTQTPSPYSF KFDILSFADK SNLTLYFLKA NDTIETATYK ISAINPTAPQ SLVVPKGEYS IKVIAVENGT KTVVYASEMM DFNNEDNVTM VLNKDASTSF GYNLVKL
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