Gene Shewmr4_3415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3415 
Symbol 
ID4253981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4079134 
End bp4080507 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content46% 
IMG OID638120053 
Producthypothetical protein 
Protein accessionYP_735538 
Protein GI113971745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.636274 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAACA ATAAACTAAA AGGATTCGCG GTTTTGACCT TCGCCTGTTT GGGCGTGACC 
GCTTGTGGTG GCTCCGATAA CAACAAGGAT GAGGACACCT CGAAGACCGA TACTTATGTG
CAATTCTACA ATGCTTCAGT GGGGAGTACG GCCACTGCAC TTAAGATTGG CGATAAAACC
TATGAGAGCG TGAGCTACGC CGATGCGATG CCAAGGTTTA CTTCAACACC GGGCGTGAGT
GCCGTCGAGG TAATGGGTAA AGATGCGTCT AACAAGGATA TTTCGATCTA CAAAGAGGAT
ATCGATCTAA AAACCGCAAC TGATCACTTC TTTGTGTTGC ATGGGGATTT TGCCTCGCCA
TCGCTGCTAA ATATCAATTA CTCCCGCACT GAGTTAGATA AGCAAAATGC CGAAGCGGAT
AAGAGCAAAA TGCAATTATT GATCGCCCAT ACGGCGATGG ATGCGCCTGC CTACGATGCC
TATATTGCCA AAGCCGATCA AAGCTTTGCC GATGCGGTGA TGCTGGGCAG TGTCTCCTAC
GGTGACGTTT CAACACCGCA GATTTTGGAC ACTGGGGATT ACAAGGTTTA CCTCGCACCT
GCGGGAACCA CCAACGTGAG CTACACCACG GCAAGCATTA ACTTTAAGTC TAAGGTGCCC
TATAAGTTGA TTTTAAGGGA AAGCTTTGGC GCCTCGGATG CCAAAATCAG CTTAGACAGT
GTCGATTCAA CCACTAATGT GCGTAATCAT GTCGCCCTCG AAAGTAGTGT AGGCTTTAGA
GTATTCAACG GCTTGGCCGC ACATAATGTC GATGTCAAAG TGGTGAGCAA TAAACAAGAA
GCCCTATTTA GCAATGTGGT TCCCTTTGGC GTGACTGCTT ATCAAGGCGC GGAGTTTAAT
GACTTTGGCG TGAGTGTGTT TGACCACACT AGCCAGGCTA AATTGCTCGA TAATGTGTTG
ATCACCCTTA ATCAGGACGA TATCAAAACC ATCTTCATCT ACGAGCAAAC CACCGAAGAG
GGTAGCCAAG TCAAGGCGAT GGAGATGAAG CAAACGCAAA CGCCAAGCCC CTACAGCTTT
AAGTTCGATA TTCTTAGTTT TGCCGACAAG AGTAACCTGA CGCTGTATTT CTTAAAGGCA
AACGACACCA TTGAAACTGC GACCTATAAG ATCAGTGCCA TTAATCCAAC GGCGCCGCAA
TCCTTAGTAG TGCCAAAAGG TGAGTATTCC ATCAAGGTCA TTGCGGTGGA AAATGGCACT
AAGACAGTAG TTTATGCATC AGAGATGATG GATTTTAATA ACGAAGATAA TGTCACTATG
GTGCTGAATA AGGACGCTTC AACCAGCTTT GGCTATAACC TCGTTAAGCT TTAA
 
Protein sequence
MLNNKLKGFA VLTFACLGVT ACGGSDNNKD EDTSKTDTYV QFYNASVGST ATALKIGDKT 
YESVSYADAM PRFTSTPGVS AVEVMGKDAS NKDISIYKED IDLKTATDHF FVLHGDFASP
SLLNINYSRT ELDKQNAEAD KSKMQLLIAH TAMDAPAYDA YIAKADQSFA DAVMLGSVSY
GDVSTPQILD TGDYKVYLAP AGTTNVSYTT ASINFKSKVP YKLILRESFG ASDAKISLDS
VDSTTNVRNH VALESSVGFR VFNGLAAHNV DVKVVSNKQE ALFSNVVPFG VTAYQGAEFN
DFGVSVFDHT SQAKLLDNVL ITLNQDDIKT IFIYEQTTEE GSQVKAMEMK QTQTPSPYSF
KFDILSFADK SNLTLYFLKA NDTIETATYK ISAINPTAPQ SLVVPKGEYS IKVIAVENGT
KTVVYASEMM DFNNEDNVTM VLNKDASTSF GYNLVKL