| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3395 |
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| Symbol | |
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| ID | 4253961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4053198 |
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| End bp | 4054499 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638120033 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_735518 |
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| Protein GI | 113971725 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00252233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACAG CTAAAACGCT TACGCTAGAG ATGCACCTCG GTGATTCAAT TATCGGGGAA
TTATCCTTTG GTGCCACGAC CGACACCTTT GCCGTGCATT ACACCAAAGA CTGGCAGCAA
AGTGGATTTC CACTTTCACC AACTATTCCC TTAGATGGCA CAGGAACGAG TAATCAAATA
TCAATGTTTT TGGTTAACTT ATTGCCAGAA AATAAAGGAT TAGATTATCT GATTGAATCG
CTTGGCGTCT CTAAGGGGAA CACCTTTGCC TTGATCCGCG CCATTGGTCT CGATACCGCA
GGTGCCATCG CTTTCGTTCC TAAAGGAGTT TTACTGCCTG AAACACAATT GCGGCCAATT
AAGGCTGAAG AAGTTATTCA ACGCATTGAA GATCCCACAA TGTGGCCGAT GGAAATTTGG
GATGGTAAAC CTCGACTATC GGTAGCGGGT GTTCAGCCTA AGTTAAACTT GTTTTATAAC
GGGAAAGAAT TTGCCTTTGC CGAAGGTACG CTGTCATCGA CCCATATTGT TAAATTCGAA
AAACATCATC ATTTAGTGAT CAATGAATTT ATAACGATGC GCTTAGCCAA AGTGATTGGG
ATGAATGTGG CGAATGTCGA TATTGTTCAT TTTGGCCGTT ACAAAGCCCT TTGTGTTGAA
CGCTTCGACA GACGTTATAT GTCAAATGAG CAAAGGGTAT TAAGAAGGCA TATTGTCGAT
AGCTGCCAAG CCCTTGGTTT TAGTGTAAGC AAAAAATATG AACGTAATTT TGGTTCAGGG
CGCGATGTTA AAGATATTCG TGAAGGGGTA AGTTTTAACA GGCTCTTTAG TCTTGCAGCA
AAATGCCGTA ATCCCGTGGC TGCTAAGCAA GACATGTTGC AATGGGCGTT ATTCAATTTA
CTGACTGGCA ATGCCGATGC ACACGGTAAA AACTACTCAT TTTTTATGAC GCCAAGCGGA
ATGGAGCCAA CTCCTTGGTA CGATTTGGTC AGCGTGGCTA TGTATGAGGA TTTTGAACAA
CAGCTTGCTA TGGCTATTGA TGACGAATTT GATCCAAATA GCATTTACGC GTATCAATTA
GCCGCGTTTA TAGATGGCTT GGGTTTACCA AGAAATCTAT TAATCAGTAA CTTAACGAGA
ATTGCGCGAA AAATACCGCA GGCAATAGCT GAGGTGATTT TAATGCTCCC GCCCCTTGAT
GAAGATGAAG CATCATTTGT GGCGCATTAC AAAACCCAGT TACTAGCGAG ATGTGAACGT
TACCTTGGTT TTGTTGACGA GGTCAGGGAT GTGGAAGTGT AG
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| Protein sequence | MSTAKTLTLE MHLGDSIIGE LSFGATTDTF AVHYTKDWQQ SGFPLSPTIP LDGTGTSNQI
SMFLVNLLPE NKGLDYLIES LGVSKGNTFA LIRAIGLDTA GAIAFVPKGV LLPETQLRPI
KAEEVIQRIE DPTMWPMEIW DGKPRLSVAG VQPKLNLFYN GKEFAFAEGT LSSTHIVKFE
KHHHLVINEF ITMRLAKVIG MNVANVDIVH FGRYKALCVE RFDRRYMSNE QRVLRRHIVD
SCQALGFSVS KKYERNFGSG RDVKDIREGV SFNRLFSLAA KCRNPVAAKQ DMLQWALFNL
LTGNADAHGK NYSFFMTPSG MEPTPWYDLV SVAMYEDFEQ QLAMAIDDEF DPNSIYAYQL
AAFIDGLGLP RNLLISNLTR IARKIPQAIA EVILMLPPLD EDEASFVAHY KTQLLARCER
YLGFVDEVRD VEV
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