Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3377 |
Symbol | |
ID | 4253943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4029586 |
End bp | 4031073 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120015 |
Product | ABC transporter related |
Protein accession | YP_735500 |
Protein GI | 113971707 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCATC ACACCACAGA CTCTCAGGCG ATAGCCGTTA AGGGATTACG CTACGGTCGC GGTAATGAAC TGTTAGTGGT TGAAGATTGG CAGCTAATGC CTGCGCAGCA TTGGGCGATT TTTGCGACCG ACAGTTATAG CGGTTCATTG CTTGGGCGGA TATTGGCTGG GGATATTGAG CCAGATGCGG GGCAAATTAC GGGGCTGCCC GCGCGAATTG GCTGGGTGTC TCTCGGTTTG CAACAGGCGC TGCTGGAGCG GGAATTAGAA AAGGACGAAC TCGATTACGG CTCGACGGTC GAGTCATTGG TGCAGGAATG CTGCCTAAAT GATGCACACT TGGCGGCCAT TTTACTGAAA GTTGAATTAA CCCATTTAAA GCATCGTGGA TTTCGGCAGT TATCGACCGG TGAAACCCGG CGGGTGATGT TAGCGCGGGC GCTGGCAACT GAGCCCAACT TGCTGATTTT AGATGACCCT TATGCAGGGC TGGATATCGA GCATCAACTC AGCCTGTCGC AGTTGCTGGT GGAGGTTGCC GAACATACGC AGCTGCTAAT CATTACCTCA CGCCAAGAAG AATTACCGCC CTGTATTAGC CATGTGGCGC TGTTTAATAG CGATATGCTC AAATCGGGTC AGCATGTGCA TCAACTGAGC GCGCCCATGT CGATTGAGCA GTGGCATACA CATCCTGTGA TGGCGCAGCT TAATGCGCTT TCGGCCAGCC GCAGCGCCGA ACTCTTGGCA TTGATGGCGC GTCAACGCCA CAATGCCGAG GCGTTCGACC CGATAGTCGA CATTAAAAAC GGCAAGGTCG AATATGTGAG CGGCTTGATT TTTAAAGGGG TGAATTGGCG GATTAGCGCG GGCCAGCATT GGCAAGTGCG AGGGCCCAAT GGTTGTGGCA AGAGTACTCT GCTCGGACTG ATTTTGGGCG ACCATCCCCA GTGTTACAGC AATGACATTA CCCTCTTTGG CCGACCCCGT GGTAGCGGCG AGAGTATTTG GCAGATTAAG CAACGGATTG GCATAGTATC GTCGGCATTG CATTTACAGT ATCGCGTCAG TTGCTCGGCG CTCGATGTCT TATTGTCGGG TTTTTACGAT TCCATCGGCC TGTATCACAA GCCCACTAAA CCCCAATTGG ATCTGGCCAA GGAATGGTTG GCGATTTTGC ACATGAGTGA GTTTGCTAGC ACGGGCTTTA AAAAACTGGA TTACGGTCAA CAGCGGCTAT TGCTCATAGG CAGAGCCTTG ATTAAACAGC CGTTATTATT GATTTTGGAT GAGCCTTATC AAGGGCTCGA CTTTATCAAT CGCACCTTAG TGATGCGGGC TTTGGATATG ATTGCCGAGC ATCATCTAAG CCAATTGTTG TATGTCTCCC ACCATAGGGA AGATGCCTTG CCTGCCATCA AAAACTTTGT CGATTTTATC AAGCAGGATG AAGGTTATTC GGTGGAGGTG AGTCGCAGTC CTGATTAG
|
Protein sequence | MQHHTTDSQA IAVKGLRYGR GNELLVVEDW QLMPAQHWAI FATDSYSGSL LGRILAGDIE PDAGQITGLP ARIGWVSLGL QQALLERELE KDELDYGSTV ESLVQECCLN DAHLAAILLK VELTHLKHRG FRQLSTGETR RVMLARALAT EPNLLILDDP YAGLDIEHQL SLSQLLVEVA EHTQLLIITS RQEELPPCIS HVALFNSDML KSGQHVHQLS APMSIEQWHT HPVMAQLNAL SASRSAELLA LMARQRHNAE AFDPIVDIKN GKVEYVSGLI FKGVNWRISA GQHWQVRGPN GCGKSTLLGL ILGDHPQCYS NDITLFGRPR GSGESIWQIK QRIGIVSSAL HLQYRVSCSA LDVLLSGFYD SIGLYHKPTK PQLDLAKEWL AILHMSEFAS TGFKKLDYGQ QRLLLIGRAL IKQPLLLILD EPYQGLDFIN RTLVMRALDM IAEHHLSQLL YVSHHREDAL PAIKNFVDFI KQDEGYSVEV SRSPD
|
| |