Gene Shewmr4_3377 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3377 
Symbol 
ID4253943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4029586 
End bp4031073 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content51% 
IMG OID638120015 
ProductABC transporter related 
Protein accessionYP_735500 
Protein GI113971707 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCATC ACACCACAGA CTCTCAGGCG ATAGCCGTTA AGGGATTACG CTACGGTCGC 
GGTAATGAAC TGTTAGTGGT TGAAGATTGG CAGCTAATGC CTGCGCAGCA TTGGGCGATT
TTTGCGACCG ACAGTTATAG CGGTTCATTG CTTGGGCGGA TATTGGCTGG GGATATTGAG
CCAGATGCGG GGCAAATTAC GGGGCTGCCC GCGCGAATTG GCTGGGTGTC TCTCGGTTTG
CAACAGGCGC TGCTGGAGCG GGAATTAGAA AAGGACGAAC TCGATTACGG CTCGACGGTC
GAGTCATTGG TGCAGGAATG CTGCCTAAAT GATGCACACT TGGCGGCCAT TTTACTGAAA
GTTGAATTAA CCCATTTAAA GCATCGTGGA TTTCGGCAGT TATCGACCGG TGAAACCCGG
CGGGTGATGT TAGCGCGGGC GCTGGCAACT GAGCCCAACT TGCTGATTTT AGATGACCCT
TATGCAGGGC TGGATATCGA GCATCAACTC AGCCTGTCGC AGTTGCTGGT GGAGGTTGCC
GAACATACGC AGCTGCTAAT CATTACCTCA CGCCAAGAAG AATTACCGCC CTGTATTAGC
CATGTGGCGC TGTTTAATAG CGATATGCTC AAATCGGGTC AGCATGTGCA TCAACTGAGC
GCGCCCATGT CGATTGAGCA GTGGCATACA CATCCTGTGA TGGCGCAGCT TAATGCGCTT
TCGGCCAGCC GCAGCGCCGA ACTCTTGGCA TTGATGGCGC GTCAACGCCA CAATGCCGAG
GCGTTCGACC CGATAGTCGA CATTAAAAAC GGCAAGGTCG AATATGTGAG CGGCTTGATT
TTTAAAGGGG TGAATTGGCG GATTAGCGCG GGCCAGCATT GGCAAGTGCG AGGGCCCAAT
GGTTGTGGCA AGAGTACTCT GCTCGGACTG ATTTTGGGCG ACCATCCCCA GTGTTACAGC
AATGACATTA CCCTCTTTGG CCGACCCCGT GGTAGCGGCG AGAGTATTTG GCAGATTAAG
CAACGGATTG GCATAGTATC GTCGGCATTG CATTTACAGT ATCGCGTCAG TTGCTCGGCG
CTCGATGTCT TATTGTCGGG TTTTTACGAT TCCATCGGCC TGTATCACAA GCCCACTAAA
CCCCAATTGG ATCTGGCCAA GGAATGGTTG GCGATTTTGC ACATGAGTGA GTTTGCTAGC
ACGGGCTTTA AAAAACTGGA TTACGGTCAA CAGCGGCTAT TGCTCATAGG CAGAGCCTTG
ATTAAACAGC CGTTATTATT GATTTTGGAT GAGCCTTATC AAGGGCTCGA CTTTATCAAT
CGCACCTTAG TGATGCGGGC TTTGGATATG ATTGCCGAGC ATCATCTAAG CCAATTGTTG
TATGTCTCCC ACCATAGGGA AGATGCCTTG CCTGCCATCA AAAACTTTGT CGATTTTATC
AAGCAGGATG AAGGTTATTC GGTGGAGGTG AGTCGCAGTC CTGATTAG
 
Protein sequence
MQHHTTDSQA IAVKGLRYGR GNELLVVEDW QLMPAQHWAI FATDSYSGSL LGRILAGDIE 
PDAGQITGLP ARIGWVSLGL QQALLERELE KDELDYGSTV ESLVQECCLN DAHLAAILLK
VELTHLKHRG FRQLSTGETR RVMLARALAT EPNLLILDDP YAGLDIEHQL SLSQLLVEVA
EHTQLLIITS RQEELPPCIS HVALFNSDML KSGQHVHQLS APMSIEQWHT HPVMAQLNAL
SASRSAELLA LMARQRHNAE AFDPIVDIKN GKVEYVSGLI FKGVNWRISA GQHWQVRGPN
GCGKSTLLGL ILGDHPQCYS NDITLFGRPR GSGESIWQIK QRIGIVSSAL HLQYRVSCSA
LDVLLSGFYD SIGLYHKPTK PQLDLAKEWL AILHMSEFAS TGFKKLDYGQ QRLLLIGRAL
IKQPLLLILD EPYQGLDFIN RTLVMRALDM IAEHHLSQLL YVSHHREDAL PAIKNFVDFI
KQDEGYSVEV SRSPD